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NECEvent2014_6_7_scaffold_315_16

Organism: NECEvent2014_6_7_Clostridium_perfringens_28_32

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(13342..14142)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine ABC transporter, permease protein PotC n=4 Tax=Clostridium perfringens RepID=Q0TNZ1_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 266.0
  • Bit_score: 514
  • Evalue 5.30e-143
  • rbh
potC; spermidine/putrescine ABC transporter permease PotC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 266.0
  • Bit_score: 514
  • Evalue 1.50e-143
Spermidine/putrescine ABC transporter, permease protein PotC {ECO:0000313|EMBL:EDT16328.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 266.0
  • Bit_score: 514
  • Evalue 7.50e-143

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 801
ATGGTAAAAAAGTTAGGTGATTTTATTTCTAAATTTTATTTAGCCTTAGTATTTATATTTTTATATGCACCAATAGTAACACTTATGGTATTTTCATTTAACAAAACAAAATCTATGGCTGTTTGGGGTGGCTTTACTTTTGATTGGTATAGCTCCCTACTTGAAAATGATAGAATAATAGCAGCTCTTTATTATACAGTTTTAATAGCAGTAATAGCCTCTGTTGTTGCTACGGTTATAGGGACTATAAGTGCTATAGGAATTAATAATATGAAAAAAGGTCCTAGAACCTTATTATTAAACGTAAACTATTTACCTGTATTAAATCCTGATATAGTTACAGGTATTTCATTAATGACTTTATTCGCTATTGGTGGAGTTTTATTTAATTTAAAACCTGGTTTTTGGACTATGCTTTTAGCTCACATAACATTTGATATTCCTTATGTTATATTATCTGTTTTACCTAAGCTAAGACAATTACCTCCAAATCTAACTGATGCAGCCTTAGATTTAGGAGCAAAACCATCTTACGCTTTAAGAAAGGTAGTAATTCCTCAAATAATACCTGGTATAGCTGCAGGATTCTTAATAGCATTTACAATGTCAATAGATGACTTTGTTATAAGTTTCTTCACTACAGGTCCTGGTGTTTCTAACCTTTCTATAGAAATTTATTCTATGGCTAGAAGAGGTATTTCTCCAGAAATAAATGCTCTTTCAACATTAATGTTTATAGTTGTCTTAGCATTACTTCTTATTGCTAATAGAAAACAATCTTTAGTAAAGGGGGAACGTTAA
PROTEIN sequence
Length: 267
MVKKLGDFISKFYLALVFIFLYAPIVTLMVFSFNKTKSMAVWGGFTFDWYSSLLENDRIIAALYYTVLIAVIASVVATVIGTISAIGINNMKKGPRTLLLNVNYLPVLNPDIVTGISLMTLFAIGGVLFNLKPGFWTMLLAHITFDIPYVILSVLPKLRQLPPNLTDAALDLGAKPSYALRKVVIPQIIPGIAAGFLIAFTMSIDDFVISFFTTGPGVSNLSIEIYSMARRGISPEINALSTLMFIVVLALLLIANRKQSLVKGER*