ggKbase home page

NECEvent2014_6_7_scaffold_645_2

Organism: NECEvent2014_6_7_Clostridium_perfringens_28_32

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(1394..2299)

Top 3 Functional Annotations

Value Algorithm Source
Ribose ABC transporter, ribose-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSV0_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 589
  • Evalue 2.50e-165
  • rbh
Ribose ABC transporter, ribose-binding protein {ECO:0000313|EMBL:EDT27108.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 301.0
  • Bit_score: 587
  • Evalue 1.30e-164
rbsB; ABC-type sugar transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 301.0
  • Bit_score: 581
  • Evalue 1.10e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 906
ATGCATATAAATAAAAAGATATTTTCAGTTGGATTAATGCTCATGATGCTTATGACTTCATTTATAGGGTGTGGAAGAGATAATAAGCCTAAAATAGGAATGGTATTATCAACTCTTAATAACCCATTCTTTGTAAATATGAAAGATGGAGCAGAAAAAGAGGCTGAAAAATTAGGATATGATTTAGTAGTATTAGATTCTCAAAATGATCCAGCTAAGGAAAGAGCAAATGTAGAGGATTTAGTACAATTAGGAGTTATTGCCTTACTTATAAATCCAACAGATAGTGATGCCGTAGTTAAGACTGTTGAGGTAGCTAATAAGAGTAATATTCCAGTAATAACATTAGATAGACAAGCTAATGGTGGAAAAATAACAAGTCATATAGCTTCAGATAATATAAAAGGTGGAGAAATGGCTGCTGAGTATGTATTAGATAAATTCAAAGATGAAAAAGGACCAATAAATGTAGTTGAGATACAAGGTATTCCAGGTGCATCAGCTACTAGAGATAGGGGAGAAGGATTCCATAATATAATGGACAAAAATGATAAATTTAACTTTATTTCAATACAAGCTGCTGATTTTGATAGACAAAAAGGTCTTCAAGTTATGGAAAATATAATCCAAGCTAATCCTAATATACAAGTTGTATTTGCTCATAATGATGAAATGGCTTTAGGGGCAGTTAAAGCAATTAAGGCTAGTGGAATAAATGCATTAGTTATAGGATTCGATGGAAATGATGATGCTAAAGATTCCATAGATGCTAATGAAATGACAGCTACAATAGCTCAACAACCAGATTTAATTGGAGCATTAGGAGTAGAATTAGCTAATAAGATATATAAGGGTGAAAGCATTAAAGATAAAATAGCAGCAGACCTTAAGGTATATACTAAATAA
PROTEIN sequence
Length: 302
MHINKKIFSVGLMLMMLMTSFIGCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGYDLVVLDSQNDPAKERANVEDLVQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDRQANGGKITSHIASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRDRGEGFHNIMDKNDKFNFISIQAADFDRQKGLQVMENIIQANPNIQVVFAHNDEMALGAVKAIKASGINALVIGFDGNDDAKDSIDANEMTATIAQQPDLIGALGVELANKIYKGESIKDKIAADLKVYTK*