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NECEvent2014_6_7_scaffold_2540_5

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(2832..3020)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Clostridium botulinum RepID=UPI0002EF7F6E similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 62.0
  • Bit_score: 123
  • Evalue 8.20e-26
rpoD; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 62.0
  • Bit_score: 123
  • Evalue 2.30e-26
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.; similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 62.0
  • Bit_score: 123
  • Evalue 1.10e-25

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Taxonomy

Clostridium sp. K25 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 189
TTAACACCAAGAGAAGAAAAGGTACTGAGATTAAGATTTGGTTTAGATGATGGAAGAGCTAGAACCCTAGAGGAAGTTGGAAAAGAATTTAATGTAACAAGGGAAAGAATAAGACAAATAGAAGCAAAAGCCCTAAGAAAACTAAGACATCCAAGTAGATCAAAAAAACTTAGAGATTATTTAGACTAA
PROTEIN sequence
Length: 63
LTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLRDYLD*