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NECEvent2014_6_7_scaffold_1905_5

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(2766..4100)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, cellobiose-specific IIC component n=112 Tax=Clostridium difficile RepID=G6BHR6_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 444.0
  • Bit_score: 871
  • Evalue 3.70e-250
  • rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 444.0
  • Bit_score: 871
  • Evalue 5.30e-250
PTS system transporter subunit IIC similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 444.0
  • Bit_score: 870
  • Evalue 1.80e-250

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1335
ATGAATAGATTGGAAAGAATACTTATGCCATTGGCTGAAAAAATAGGTAAAAATAAATTATTAATTGCAATTAGAGATGGTTTTTTAGTATCATCACCATTATTAATAATAGGTTCATTATTTTTATTAGTAGCAAATTTTCCTATAAAAGGATGGAATGAATTTGTAGGTCAAATTTTTGGTCCAGATTGGGCTGTAAAATTGCAACAACCAACTGTAGCAACATTTGAAGTAATGACTCTACTTGCAGTTTTAGGGATTGGATATTCTTATGCAAAGCAAATAGATGTAGACCCAATAGCATCAGCAGCAGTTGCAATAGTTGCCTTTTTTATAATAACACCATTTGTAATACCATATACACCAGAAGGAACAGAATCAGTTTACATGGTAACAGGTATACCACTAGGTTGGATGGGTTCTAAGGGAATGTTTGTAGGTATGATAACAGCAATAACCTCTGTAAAATTATTTGCTGCAGTTGTAAAAAAAGGATGGACATTGAAAATGCCAGATGGAGTTCCTCCAACTGTATCAAAATCATTTGCAGCATTAATACCAAGTGCAATAGTTATGGTAGTTTTCTTTTTAGTTAAGATAGCTTTTGAAGCTACACCATATGGAAGTATACATGAATTTATATTTAAGTTTTTACAAATGCCATTATTAAAATTAGGAAATAGTTTAGGTGCTATGGCAATCGCTTATATATTCTTACATTTATTCTGGTTCTTTGGAATAAATGGAAGTAGTGTTGTTGGGGCTGTGTATAATCCAATATTAAAAATTCTATCAGCTGAAAACTTAGCTGCTTTTCAAGCTGGTTCAAAAATACCAAACATAATAACAGGTCAATTCCAAGATATGTTTGCGACATTTGGTGGAGCAGGTAGTACACTATCATTAGTCATAGCTATGTTATTAATATGTAAAAGTAAACGTATAAAGTCAATGGGAAAACTATCAATTTTACCAGGAATATTTGGTATAAATGAGCCATTGATATTTGGTCTACCAATAATGCTTAACCCAATACTATTGATACCATTTGCAATAGTTCCAACAATAAATATAATAATAGCTTACTTCTGTATGTCAGCAGGATTAGTGCCTCTTACAAATGGAGTTCAGTTACCATGGACAACTCCAATTATATTCTCTGGTTTTTTAACAACAGGATGGCAAGGTGCAGTCTTACAATTAGTACTTCTTATACTAGGAATATTTATGTATATACCATTTATAAAAATGCTAGATAAGCAATACTTGAGAGAAGAAAATGAAACTGTTGAAGAGGAAGATGATGATATATCTTTTGATGATTTAGTATTATAG
PROTEIN sequence
Length: 445
MNRLERILMPLAEKIGKNKLLIAIRDGFLVSSPLLIIGSLFLLVANFPIKGWNEFVGQIFGPDWAVKLQQPTVATFEVMTLLAVLGIGYSYAKQIDVDPIASAAVAIVAFFIITPFVIPYTPEGTESVYMVTGIPLGWMGSKGMFVGMITAITSVKLFAAVVKKGWTLKMPDGVPPTVSKSFAALIPSAIVMVVFFLVKIAFEATPYGSIHEFIFKFLQMPLLKLGNSLGAMAIAYIFLHLFWFFGINGSSVVGAVYNPILKILSAENLAAFQAGSKIPNIITGQFQDMFATFGGAGSTLSLVIAMLLICKSKRIKSMGKLSILPGIFGINEPLIFGLPIMLNPILLIPFAIVPTINIIIAYFCMSAGLVPLTNGVQLPWTTPIIFSGFLTTGWQGAVLQLVLLILGIFMYIPFIKMLDKQYLREENETVEEEDDDISFDDLVL*