ggKbase home page

NECEvent2014_6_7_scaffold_1559_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 272..2848

Top 3 Functional Annotations

Value Algorithm Source
FtsX-like permease family protein n=6 Tax=Clostridium difficile RepID=T3IK88_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 858.0
  • Bit_score: 1657
  • Evalue 0.0
  • rbh
ABC-type transport system, permease {ECO:0000313|EMBL:CAJ67159.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 858.0
  • Bit_score: 1657
  • Evalue 0.0
ABC-type transport system, permease similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 858.0
  • Bit_score: 1657
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2577
ATGAAAGATAATTTGAAAATAGTACTAAGGTATATAAAAAGTTATAAAGCTAGGTCTTTAGCAATTGTTGTGAGTATAATTCTTGCTACATCACTCGTTGTTGGTATTGGTACCCTCTCAAGAAGTGCTCAGCAAGCAGATGTAGATAGATTGAAAAGAGAGCTTGGAACTGACCATGTATACTTTAAAAATATAAAGAAAAATCAATTAAAGTCCATAAAATCTAGCAAAGATATTAAAAATCTGGGTATAACATCTTACTATGCGTCTACAGATGTTAATGAAAAATTACCTATAAACATACTATATGCAAATAAAAATTATTTGACTAGTCATTCTAAACTTATAAAAGGTCGATTTCCAAAAGCTAGCAATGAGGTGGTAGTCGAGAAATGGATTTTAAATAGTATGGGCTTAAAACCAGAGATAAATCAAAACCTTACTTTTAAATTATATCAAAAAGAAAATCCAGAAACTTTTAAAGTTGTTGGAATCCTTGAAGATAGATTTATAGAGAAAAAAATGGGACAATGTGAAATTTTTTCTAATCTCAATGAATCAAAACTAAGTGATTTTACAACTTATATTGAATTTAATGAAGGCAGTGATATAAATACAAACATAGACAATATAATAAAAAATGCTATGTTAGATGAGAAAAGTATAGGAAGAAACTCAATGCTTATAGAATCTACTATGAAAAACGGTACTTTAGATAATTCAAGTAAATACGTTGCAATTGCTATGAGTCTATTTGCTGGTATTGTAATATATAGTATCTATGTTATATCAATATACCAAAGAGTACAGGAATATGGCGTCTTAAGAGCTATTGGTTCCACCAACTTTAGGATTTTCAAACTTATGCTTTATGAACTTTTCATACTTGCTCTAATAGCAATGCCTATAGGTATATGTATAGGTATGGTAGGTGCACAAATATTTAATAGGTCTGTAGGAAATATTCAATTTGAAGGAAATATAAATGTTACACCTTTTGTTATTCCAGATAAAATAATTCTCTTATCAATTGCATGTACAATACTAATAATACTAATTATAAGTTTCTTTACATACTTAAAAATAAGAAGAATTTCTCCTATTGATGCTATCAGAAAAACTTTTGGAGCTGATAAAAATGTAACCAAAGTTAATTATTTAATATCAAAATTAACTTTAAATATGTCAGTAACAAAATCTATATCTGCGAAAAACATCTTTAGAAATAAAAAGGGGTTCATGATAATTGTATTATCTATGAGTATAGGAGGTATAATCGTCATAAAAGACAATTATAAATATTCTTTTTTAGATGTGCAAAACAAATCCGTGCAAGAACAAACATATATGAATGCAGATTTTATTCTATCAAATGTTTATCTCAATGAAACTGGTAACAATACTTCTTTTAAAGATATAAAAGGGTTTAGTGATAGTCAGATAGATAAAATAAAAAATATAGATGGAATTGACAAAGTCAAAACTGCTAGTATCTTAAACACAAGAATAGAGGTAAATAAAATAAATAAATTAGATTACTACGAAGCTATTAATTCAAAACCTTATTATAAACTAAATCCTCTGTTCATAAAAAATAAGACTACTGGCAAATATACACTAAAGCAAAAGCTAAAAGGTTATAATGATGAGATGATAAAGTCATTAGAAAAATACTTAGTAAGTGGAAATATAAACTTGAAAAAAATGAAAAAAGAAAATTTAGCTATTGTATATGTACCAGAAATTTCTAAAACACAGAAATACACAAAGACTTTTACTCCTGGTGAAGGGACACCAGCTGTAGATATAAAAGTAGGTGATACTATAAAAGTCAAATATCCAAAGGGTGGGATGGATACAGGGCTTTATGAAAGTCTAAAAGATAATTATGAATACTTAGAATATGAATTTAAAGTTGGAGCTATTATAAGTTATACTTTTGCAGATAATGGTATGTACTCTGGAGATGATGGTGTAGATGTAATAACGAGTAGCGAATACCTAAAAAAATTAACTGGTGTAGATAAATATAACTTAATTTATGCAGACCTTAATGAAAATGCAAACAAGAAAAAAATAAATAACCTTTTAGGTAAAATTGGAAGTGAAGTTCCTGGAACTACAACAGTAGATATGATGGTAGAAAAAGAAAATTCTGATAAGATGACATCTAGAACTATGATTTATAGTTATGGCATAGTAGCAATAATGTTCATAATCAGTGTACTTAACATAATAAACAACATAAGTTATAACTTAACTTCAAGAACTAGTGAATTTGGAATGTTAAGAGCTATTGGTATCTCTGAGAGAGAATTTAAAAATATGATACTTTATGAAGGAATATTATATGGTGTACTCTCAAGTATAATTACTATCGTGTCAGGACTTATAATACAACTTAAAATGTATTATATGCAGGGCTTTATATCACATGGATTGGGATTTTCAATAGATTACAAAATATATATACTAGTTGTTGTAGCAAATATAATTGTAGGTATTCTAGCTACATATATTCCATCAAGAAAGATAAATAAAATTAGTATAGTTGAAGCTATAAACATTACAGAATAG
PROTEIN sequence
Length: 859
MKDNLKIVLRYIKSYKARSLAIVVSIILATSLVVGIGTLSRSAQQADVDRLKRELGTDHVYFKNIKKNQLKSIKSSKDIKNLGITSYYASTDVNEKLPINILYANKNYLTSHSKLIKGRFPKASNEVVVEKWILNSMGLKPEINQNLTFKLYQKENPETFKVVGILEDRFIEKKMGQCEIFSNLNESKLSDFTTYIEFNEGSDINTNIDNIIKNAMLDEKSIGRNSMLIESTMKNGTLDNSSKYVAIAMSLFAGIVIYSIYVISIYQRVQEYGVLRAIGSTNFRIFKLMLYELFILALIAMPIGICIGMVGAQIFNRSVGNIQFEGNINVTPFVIPDKIILLSIACTILIILIISFFTYLKIRRISPIDAIRKTFGADKNVTKVNYLISKLTLNMSVTKSISAKNIFRNKKGFMIIVLSMSIGGIIVIKDNYKYSFLDVQNKSVQEQTYMNADFILSNVYLNETGNNTSFKDIKGFSDSQIDKIKNIDGIDKVKTASILNTRIEVNKINKLDYYEAINSKPYYKLNPLFIKNKTTGKYTLKQKLKGYNDEMIKSLEKYLVSGNINLKKMKKENLAIVYVPEISKTQKYTKTFTPGEGTPAVDIKVGDTIKVKYPKGGMDTGLYESLKDNYEYLEYEFKVGAIISYTFADNGMYSGDDGVDVITSSEYLKKLTGVDKYNLIYADLNENANKKKINNLLGKIGSEVPGTTTVDMMVEKENSDKMTSRTMIYSYGIVAIMFIISVLNIINNISYNLTSRTSEFGMLRAIGISEREFKNMILYEGILYGVLSSIITIVSGLIIQLKMYYMQGFISHGLGFSIDYKIYILVVVANIIVGILATYIPSRKINKISIVEAINITE*