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NECEvent2014_6_7_scaffold_3121_2

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(1454..2365)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Clostridium difficile RepID=T2Y2X3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 600
  • Evalue 8.40e-169
  • rbh
Transcriptional regulator, HTH-type similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 303.0
  • Bit_score: 600
  • Evalue 3.10e-169
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CAJ69049.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 303.0
  • Bit_score: 600
  • Evalue 1.50e-168

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 912
GTTATAGAGGATAGCCACTTTAACCCTCAATCTAAACTACCTAGAGTAGAAGAGATTTCTTATAGAGAAAAAATAATTATAATACATAAAATATATTCATTTATGGAGAATTATATTAAGTTTCCAAAAGAAAACTTGCCAAATAGAAAAGTAATGTCAGATATTAATATAAATGATATAGAATCTCTTGCATATAAGACTAGAGAGTTTTGGGATTTAAATAGTACTCCAATAGTAAATATGGTAAGTTTGTTAGAGTCTAAAGGGATTATAATATCAGGTATGAATGTAGATAGAAAAGGGGCAACTATCTTTACTCAAAAACAGAGAATTAGTAAAGAATCTAAATATCTAATATCTCTGGGTAATGACAAAAAGTCAGCATCAATTAGAAATTATACTTTGGCATGTGAGCTTGGATATATAATATCAAGTGAATTAAGAATACCAAGTAAGCAATTTTCAGAAGATGAGTATGCCTGTGCATTTTTATTGCCAAAAGAGAGTTTTTTAAAAGATTTGACTCATCCAGAAGATTTAGATTATTATGTAGAACTAAAGAAAAAATGGATTGTACCTATATCTGCTATGATTTTTAGAGCATATAATCTAGAAAAGATAAATTACAAAAAATACAATTATCTTATGAATGAAATGGATAAAAAAGGCTGGTTGATAGAAGAACCACTAGACAAAATGAAAGGTTCAAGCCCAACGTATTTAAAAAGAGCAGTTGAATTATTGATAGAAAATAAAATAATGAGTGTAAATAGTATAGTATCAAGTTTAGAGGAATTTGGAATAAATCTTTATCCAGAAGACTTAGAATTATTGATGGGATTGAAAAAAGGATTGTTATCTCAAGAGGTAAATAAAAAAAGTAAAGTTATAAAATTTGATGGTAAAAAATAG
PROTEIN sequence
Length: 304
VIEDSHFNPQSKLPRVEEISYREKIIIIHKIYSFMENYIKFPKENLPNRKVMSDININDIESLAYKTREFWDLNSTPIVNMVSLLESKGIIISGMNVDRKGATIFTQKQRISKESKYLISLGNDKKSASIRNYTLACELGYIISSELRIPSKQFSEDEYACAFLLPKESFLKDLTHPEDLDYYVELKKKWIVPISAMIFRAYNLEKINYKKYNYLMNEMDKKGWLIEEPLDKMKGSSPTYLKRAVELLIENKIMSVNSIVSSLEEFGINLYPEDLELLMGLKKGLLSQEVNKKSKVIKFDGKK*