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NECEvent2014_6_7_scaffold_4900_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(2..1420)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 473.0
  • Bit_score: 940
  • Evalue 1.50e-271
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 473.0
  • Bit_score: 940
  • Evalue 7.50e-271
DNA-directed RNA polymerase subunit beta n=5 Tax=Clostridium difficile RepID=U3XQJ5_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 473.0
  • Bit_score: 940
  • Evalue 5.30e-271

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1419
GGTAGAATGTGTCCAATAGAGACTCCAGAGGGACCAAATATCGGTCTTATAAACTCTCTAGGAACTTATGCAAAAATAAATGAATTTGGATTTATAGAATCACCATATAGAAAATTTGATAAAGAAACATCAACAGTTACTGATGAAATACATTATTTAACTGCTGACGAAGAAGATTTATTCGTAAGAGCTCAGGCAAATGAGCCATTAACAGAAGATGGTAAATTCGTAAACCATAGAGTTGTTTGTAGAACTGTAAATGGTGCTGTTGAAATGGTTCCTGAAAGTAGAGTAGATTACATGGATATATCTCCTAAGCAGGTTGTATCTGTTGCCACTGCTATGATACCTTTCTTAGAAAATGATGATGCCAACCGTGCCCTTATGGGAGCGAACATGCAGCGTCAGGCAGTGCCTCTAGTTAGAAGAGAAGCACCAATTATAGGAACTGGTATAGAATACAGAGCAGCAAAAGACTCTGGAGCAGTTGTTGTTGCTAGAAATTCTGGTATAGCAGAAAGAGTAACAGCAGATGAAATAATTATAAAAAGAGAAGATGGAAACAGAGATAGATATAATCTACTTAAGTTTAAACGTTCAAACTCAGGTACTTGTATAAATCAAACACCTATAATAAATAAGGGTGACCAGATAATAAAAGGTGATGTTATAGCAGATGGTCCAGCAACTGATTTAGGAGAAGTTGCACTTGGAAGAAACTGTCTTATAGCATTCATGACTTGGGAAGGTTATAACTACGAGGATGCTATATTAATAAATGAAAGATTAGTTAAAGAAGATAGATTATCAACAATTCATATAGAAGAATATGAATGTGAAGCTAGAGATACAAAACTAGGGCCAGAGGAAATAACTAGAGATATACCTAATGTTGGAGATAGTGCAATTAAGAACTTAGATGACAGAGGTATAATAAGAATAGGTGCAGAAGTAGACTCAGGTGATATATTAGTTGGTAAAGTAACTCCAAAAGGAGAAACTGAACTTACTGCTGAGGAAAGATTACTTCGTGCAATATTTGGAGAAAAGGCTAGAGAAGTTAGAGATACTTCACTTAAAGTGCCTCATGGTGAATCTGGTATAATAGTTGATGTAAAAGTATTTACTAGAGAAAATGGAGATGATTTATCTCCAGGAGTAAATGAATTAGTAAGATGCTATATAGCTAAAAAGAGAAAAATAAAAGTTGGAGATAAAATGGCTGGTCGTCATGGTAATAAAGGGGTTATCTCAAGAGTATTACCTGAAGAAGATATGCCATTCATGGAAAATGGAACACCACTAGACATAATACTTAATCCACAAGGTATACCATCACGTATGAACATTGGTCAGGTTTTAGAAGTTCATTTAGGACTTGCTGCTAAGACATTAGGATGGTATGTAGCAACATCAGTA
PROTEIN sequence
Length: 473
GRMCPIETPEGPNIGLINSLGTYAKINEFGFIESPYRKFDKETSTVTDEIHYLTADEEDLFVRAQANEPLTEDGKFVNHRVVCRTVNGAVEMVPESRVDYMDISPKQVVSVATAMIPFLENDDANRALMGANMQRQAVPLVRREAPIIGTGIEYRAAKDSGAVVVARNSGIAERVTADEIIIKREDGNRDRYNLLKFKRSNSGTCINQTPIINKGDQIIKGDVIADGPATDLGEVALGRNCLIAFMTWEGYNYEDAILINERLVKEDRLSTIHIEEYECEARDTKLGPEEITRDIPNVGDSAIKNLDDRGIIRIGAEVDSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPHGESGIIVDVKVFTRENGDDLSPGVNELVRCYIAKKRKIKVGDKMAGRHGNKGVISRVLPEEDMPFMENGTPLDIILNPQGIPSRMNIGQVLEVHLGLAAKTLGWYVATSV