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NECEvent2014_6_7_scaffold_5209_2

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(892..1311)

Top 3 Functional Annotations

Value Algorithm Source
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 282
  • Evalue 2.50e-73
L-rhamnose isomerase n=27 Tax=Clostridium difficile RepID=T2V0U2_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 282
  • Evalue 1.80e-73
L-rhamnose isomerase similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 139.0
  • Bit_score: 239
  • Evalue 6.40e-61

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
GATAAAGTTGCACTTCATGTAAGTCGTCCAGTGCGTTGGGATAGTGACCATGTAGTTATATTAGATGATGAACTAAAAGAAATAGCCAAGGAAATAGTAAGAAATGATGCTTTGGATAAAGTAATAATAGGACTAGACTTCTTTGATGCAAGTATAAATCGTATAGCAGCATGGGTAATTGGAACTAGAAATATGATAAAAGCATTGTTATCAGCTATGTTAATGCCTCATGAAGAATTAAGAAAATTACAAGACGAAGGCGATTTTACAAAAAGATTGGCTATAATGGAAGAGTTCAAAACATATCCAATGGGAGACATATGGAACTATTATTGTAAAATTAATAATGTTGCTGTTAAAGAAGATTGGATAGAAGTAGTAAAAGAGTACGAATTAACAGAATTATTAAATAGAAAGTAG
PROTEIN sequence
Length: 140
DKVALHVSRPVRWDSDHVVILDDELKEIAKEIVRNDALDKVIIGLDFFDASINRIAAWVIGTRNMIKALLSAMLMPHEELRKLQDEGDFTKRLAIMEEFKTYPMGDIWNYYCKINNVAVKEDWIEVVKEYELTELLNRK*