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NECEvent2014_6_7_scaffold_8003_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 3..686

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; ( similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 222.0
  • Bit_score: 447
  • Evalue 1.30e-122
tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Clostridium difficile DA00307 RepID=T3YYB3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 222.0
  • Bit_score: 447
  • Evalue 8.90e-123
  • rbh
radical SAM protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 222.0
  • Bit_score: 447
  • Evalue 2.50e-123

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
ATGTATGGATGCAATAATTTCTGCACATATTGTATAGTCCCATACACAAGAGGAAGAGAAAGAAGTAGAACTCCTGAAGATATAATTAACGAGATAAAAGAGCTTGTTGCAAATGGAACGAAAGAAATCACTTTACTTGGACAAAATGTAGATTCTTATGGTAAGACACTTGAAAATCCAGTTTCATTCTCAGAACTTTTAAGAAAAGTGAATGATATAGAAGGAATTGAAAGGGTTCGATTTATGACATCTCATCCAAAAGATATATCTGATGAAGTAATATACGCAATTAGAGATTGTGATAAGGTGTGTGAGTTTTTACATCTACCAATACAATGTGGAAGCAGTAGCCTTTTGAAAAAAATGAATAGACATTATACAAAGGAATATTATTTAGAAATAATAGAAAAAGCTAAAAAGGAAGTTCCAGGTATTGCTTTTTCTACAGACTTAATGATTGGTTTCCCAGGAGAAACAGAAGAAGATTTATTGGACACTTTAGATGTGGTTGAAAAAGTTAGATATGATTCAGCTTTTACATTTATTTATTCTAAAAGACAGGGAACTCCTGCTGCTAAAATGGAAAATCAAATACCAGAAGATATAAAGCATGATAGATTTAATAGGGTGTTAGAAGCTGTAAATAGGATTTCTGCATTACTGAACCTAGAACTTTTTCATTAA
PROTEIN sequence
Length: 228
MYGCNNFCTYCIVPYTRGRERSRTPEDIINEIKELVANGTKEITLLGQNVDSYGKTLENPVSFSELLRKVNDIEGIERVRFMTSHPKDISDEVIYAIRDCDKVCEFLHLPIQCGSSSLLKKMNRHYTKEYYLEIIEKAKKEVPGIAFSTDLMIGFPGETEEDLLDTLDVVEKVRYDSAFTFIYSKRQGTPAAKMENQIPEDIKHDRFNRVLEAVNRISALLNLELFH*