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NECEvent2014_6_7_scaffold_4693_2

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 277..1092

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=187 Tax=Clostridium difficile RepID=RS3_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 271.0
  • Bit_score: 541
  • Evalue 4.20e-151
  • rbh
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 271.0
  • Bit_score: 541
  • Evalue 1.20e-151
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 271.0
  • Bit_score: 541
  • Evalue 5.80e-151

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 816
ATGGGTCAAAAGGTTAATCCACACGGCTTAAGGGTCGGTGTTATAAAAGATTGGGACTCAAGATGGTTCGCTACTGATAAAAAAGAGTTCGGAAACTTATTATTAGAAGACCATAATATACGTAAATTCTTAAAGAAAAGATTATACTCAGCTGGAGTTGCTAAGATAGAAATAGAAAGATCAGCTAACAAAATAAAAATGGACTTACACGTTGCTAAGCCTGGTGTAGTTATAGGAAGAGCTGGTGCAGGAATCGAAGCATTAAAAGCTGAATTAGAAAAAATGACAAAGAAAACTATAATAGTTAATATAGTAGAAGTAAGAAGTACAGATAAAAATGCTCAATTAGTAGCTGAGAATATAGCTTTAGCTATAGAGAGAAGGGTTGCTTTCAGAAGAGCAATGAAACAAGCTATACAAAGAGCAATGAAATCTGGTGCTAAAGGGATAAAAGTTTCTGCTTCAGGAAGATTAGGTGGAGCTGAAATGGCTAGAACTGAAGGTTATAGTGAAGGAAATGTGCCACTACAAACTTTAAGAGCAGATATAGATTATGGTTTCGCTGAAGCTGATACAACTTATGGAAAAATCGGTATAAAAGTTTGGATATGTAATGGTGAAGTTTTACCAACTAGAGACGGTGTAAATCCAAGAGAAGAAAGCAGAAAGAGCGATAGAAGAGACAACAAGAGAGATAATAGAAGAAACGATAGAAGAGGAAATGACAGAAGAGGAAATGATAACAGAGGAAACTACAGAGGACAAAGACCTCAAGGTGGATCAAGACCTCAAAGAACTGAAAACAAAGGAAATTAA
PROTEIN sequence
Length: 272
MGQKVNPHGLRVGVIKDWDSRWFATDKKEFGNLLLEDHNIRKFLKKRLYSAGVAKIEIERSANKIKMDLHVAKPGVVIGRAGAGIEALKAELEKMTKKTIIVNIVEVRSTDKNAQLVAENIALAIERRVAFRRAMKQAIQRAMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLRADIDYGFAEADTTYGKIGIKVWICNGEVLPTRDGVNPREESRKSDRRDNKRDNRRNDRRGNDRRGNDNRGNYRGQRPQGGSRPQRTENKGN*