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NECEvent2014_6_7_scaffold_4825_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 1..1440

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1151334 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 480.0
  • Bit_score: 939
  • Evalue 1.70e-270
Transcription-repair-coupling factor n=1 Tax=Clostridium difficile Y401 RepID=T4GZ05_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 480.0
  • Bit_score: 939
  • Evalue 1.20e-270
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 480.0
  • Bit_score: 939
  • Evalue 3.40e-271

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1440
GGCTTAGAAACGACCATTTCTAAAGATAGAGATATTGAAATTAAATCTTCACAAGTTATAATTGTACCTGCACACATAAACAGTGGTTTTCAGTATAAATCTATAAAGTTTGTTGTTATAACAGATAACGAAATGATAGGTGTTTATAAAAGAGCGTCTAAGACTAGCAATAAAAAAGTTAAAAAGGGAAAGAAAATAGAATCCTTTTTAGATTTAAGTGTTGGAGACTATGTAGTTCATGAAAATAGTGGTGTAGGTAGATACACAGGGATTGAACAAATTACAGTCAATGCTATTAAAAAAGATTATATGAAAATAGTATATCAAGGTGGAGATAATCTATATGTGCCAATAGACCAGATGGACAAAGTACAAAAATATATTGGTGCAGAAGTAGAAAAAGTTAAGTTAAATAAGCTTGGAACAAATGAGTGGACGAAAGCAAAAGCAAAAGTTAAAAAAGAAATTGAAGATATGACAAAAGACTTGATTGAGCTTTATGCAAAACGTGAAAAAATACAAGGGTATAAGTTTTCAAAAGATACACCTTGGCAGGCAGAGTTTGAATCGTTGTTTCCATATCAAGAAACAGAAGACCAATTAAAGGCTATAGAAGAAACTAAAAAAGATATGGAATCAAGTAAGGTAATGGATAGGCTAGTATGTGGAGATGTTGGTTATGGAAAAACAGAGGTAGCTATTAGAAGTATTTTTAAAGCTTGTATGGACCAAAAACAAGTTGCTGTATTAGTTCCAACAACAATATTGGCCCAACAACATTATAATACATTCAAAGAGAGGTTTGAAAATTATCCTTTGAGAGTAGAAGTTTTAAGTAGGTTTAAAACACCAAAACAACAAAAACAGATTATTGAAGATGCTAAAAAAGGATTAGTAGATATTTTAATTGGAACACATAGAATAATATCCAAAGATATAAATTTACCAAACTTAGGTCTTGTAGTCATTGATGAAGAACAAAGATTTGGAGTAAAACATAAAGAAGCTTTAAAGAAAATTAAATCTACAGTAGATGTACTTACACTTTCAGCAACTCCTATACCAAGAACATTACATATGTCTTTAAGTGGAATAAGAGACATGAGTGTTATAGAGGAACCTCCACAAGAAAGACATCCTGTAATAACATATGTTACAGAGAGTAAGGAAAGCGTAATTCAAGATGAGATAGAGAGAGAATTAAGTAGAGGTGGACAGGTATTTTTTGTATACAATAGAGTTGAACACATTGAAGAAATGGCAAGTATGATTCAAAAACTCGTACCAGATGCTAGAGTGGCTGTTGCACATGGAAGAATGACTTCTAAATCATTAGAAAATATAATCCTAGGATTTTTAAATAAAGATTATGATGTACTAGTCTGTACTACAATAATTGAAACTGGTATGGACATATCAAATGCAAATACAATGATTATA
PROTEIN sequence
Length: 480
GLETTISKDRDIEIKSSQVIIVPAHINSGFQYKSIKFVVITDNEMIGVYKRASKTSNKKVKKGKKIESFLDLSVGDYVVHENSGVGRYTGIEQITVNAIKKDYMKIVYQGGDNLYVPIDQMDKVQKYIGAEVEKVKLNKLGTNEWTKAKAKVKKEIEDMTKDLIELYAKREKIQGYKFSKDTPWQAEFESLFPYQETEDQLKAIEETKKDMESSKVMDRLVCGDVGYGKTEVAIRSIFKACMDQKQVAVLVPTTILAQQHYNTFKERFENYPLRVEVLSRFKTPKQQKQIIEDAKKGLVDILIGTHRIISKDINLPNLGLVVIDEEQRFGVKHKEALKKIKSTVDVLTLSATPIPRTLHMSLSGIRDMSVIEEPPQERHPVITYVTESKESVIQDEIERELSRGGQVFFVYNRVEHIEEMASMIQKLVPDARVAVAHGRMTSKSLENIILGFLNKDYDVLVCTTIIETGMDISNANTMII