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NECEvent2014_6_7_scaffold_5960_2

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 237..1124

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Clostridium difficile CD13 RepID=T2TYL3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 576
  • Evalue 1.70e-161
  • rbh
effD; putative drug/sodium antiporter, MATE family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 576
  • Evalue 4.70e-162
EffD {ECO:0000313|EMBL:AAK77649.1}; MATE efflux family protein {ECO:0000313|EMBL:CKH18811.1}; Putative drug/sodium antiporter, MATE family {ECO:0000313|EMBL:CEJ98588.1}; TaxID=1496 species="Bacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 296.0
  • Bit_score: 576
  • Evalue 2.30e-161

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 888
ATGAACCAGAAAAATGAAAATTACTGGCTTTTAGACGCACCTGTCACAAAAGCTATATGGCATATGGCGATTCCAATGATGCTTGGAATGTCAATAAACATTATTTACAATATTACAGATACATTCTTCATAGGCAGATTAAATGACACAGCGGCTCTTGCCGCAATCTCACTGCTGTTACCTTTCACGACCATTTTAATGGCAATTGGGAATTTGTTTGGAACAGGTGGAAGCACTTTGTTTTCACGACTGTTAGGAAGTGAAAATACGGACAGGACAAAACAATGTTCAGCTACGACATTATGGCTATCTTTCCTGTTTGGACTATTGACTGCAATAATATCCATCATTTTCAGTAACTATATTATCCGACTTCTCGGTGCTGATAGTAATACTTTTGCCTATGTCAAACAGTATCTTATTTTTTATGGAATGGGTGCTCCGTTTATTATTGCCAATTTTACGCTAGAACAGTTAATTAGAGGTGACGGTAAATCTGTAGAATCTATGATTGGAATGATGATAAGCATTGGTGCTAATATCATTCTTGACCCAATTCTGATGTTTGGATTACAGCTTGGTATTCGTGGGGCAGCCATTGCTACAGTAATCGGAAATGCTTTCGCTGTTATCTATTATATTGTCTGTATACAACGAGCAGACAATCAGTTATCTGCTCTTCCAAAATATTTCAGGCTTGAAAAACAAATGCTAAAAGAAATTTTTTTAGTTGGATTATCTGCAATGTTGTTAGATATTCTTTTGATTGTTTCAAGCCTTATGTTTAATTACTATGCACTAAAATATGGAGATTATGTGCTTGCCGGATTTGGGATTTCTCAAAAACTTGTGCAGATTGTCGACCTAATCGGCATGGGACTTTACATG
PROTEIN sequence
Length: 296
MNQKNENYWLLDAPVTKAIWHMAIPMMLGMSINIIYNITDTFFIGRLNDTAALAAISLLLPFTTILMAIGNLFGTGGSTLFSRLLGSENTDRTKQCSATTLWLSFLFGLLTAIISIIFSNYIIRLLGADSNTFAYVKQYLIFYGMGAPFIIANFTLEQLIRGDGKSVESMIGMMISIGANIILDPILMFGLQLGIRGAAIATVIGNAFAVIYYIVCIQRADNQLSALPKYFRLEKQMLKEIFLVGLSAMLLDILLIVSSLMFNYYALKYGDYVLAGFGISQKLVQIVDLIGMGLYM