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NECEvent2014_6_7_scaffold_5756_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: comp(3..1172)

Top 3 Functional Annotations

Value Algorithm Source
Lactose permease n=173 Tax=Clostridium difficile RepID=C9XL03_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 768
  • Evalue 3.00e-219
  • rbh
lactose permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 768
  • Evalue 8.50e-220
Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CCL30423.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 768
  • Evalue 4.20e-219

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1170
ATGCAAATTATACAATCTTTCATAAAAATTGCTGTAGCTCCTATAACAGGTACAGTATTTGACAAACAACCATTCAAAAAAGGAAAGTATTATCCATGGCTTAGATATGCACCAGCAGCGTTAGCATTAACATATGGAATATTTTTCATAGTTCCATTAATGAAAATAAGTCCAGCATTACTTTTACCTTTGATGACAGCTTTATTATTAATAGCATCTTGTGCTCAGCAAGTAGTTTTCACTATAATTTATGCTATTTACCCTGTAGTTGCTAAGACACCTAGAGACCGAGTTATAGGCTCAACTACTACGAATATATTTAAAGAAGTTGGTAAATTCTTAGTAGGTTTTTCATATCCGTTATTATTAGTTTTATTTGCAGATGTATTAGGTGGAGAAGGAATGGGTTATTTAGGTACCTACTTATTCTTTGCAGCAGGATGCCTTTTAGTATTTTGGTTTTCTTCAACAGAGATAATAAAATCTGGAGCAGAAGAAGAAGTTCTTCAAAAAGAAGAGAAGCCAAAGATTAAAGCAAGTGAAATGGCAAAAGCTTTATTCACTAATGTACCACTTATGATGGCATTTTGTTTAGAATTTCTTATATGTATAAGATCTATAGGATTAGGACCTTTGGCTCCATATTATTTTAAATATGTAATAGAAGATGAACGTGGATTAGCAGTATTTTTATCAATCATGCCTTTGGTAAGTGTAGCATTCATGTTTTTCGCACCAGTGTTTATAAAAATCTGTAGAGAGCAAAAACTAGCTTCAATAATTTCTTTTTCTATATGTGCACTATGCCACTTATTGGTTGCATGGACTCCTTGGGGGAAAACTACTTTAGGAGTAACTATGTTGTTGGCAATTGGTGGAGGTTTTTCAAATGTAGTATCAATAATAAATCTTAATTTCTTTGCCGGTTCTTGTGATTATGGGCATTGGAAATCAGGAAAAGACTTACCTGGCTTAAGTATGTCACTATATCCAGTTGCAATACAAGTAGGAGTATTACTTGCAACTACTATAAGAACAGTTTTAATGAACTCAATGGGATATCAAGCTGATATGGTAGTCACAGAAGCAGTTAAATCAGGTTTTATAAATATGATTTCTTATTCTATGGCAATACCTTTAATAATAGCTGTTGTTATAGCAATACTATAT
PROTEIN sequence
Length: 390
MQIIQSFIKIAVAPITGTVFDKQPFKKGKYYPWLRYAPAALALTYGIFFIVPLMKISPALLLPLMTALLLIASCAQQVVFTIIYAIYPVVAKTPRDRVIGSTTTNIFKEVGKFLVGFSYPLLLVLFADVLGGEGMGYLGTYLFFAAGCLLVFWFSSTEIIKSGAEEEVLQKEEKPKIKASEMAKALFTNVPLMMAFCLEFLICIRSIGLGPLAPYYFKYVIEDERGLAVFLSIMPLVSVAFMFFAPVFIKICREQKLASIISFSICALCHLLVAWTPWGKTTLGVTMLLAIGGGFSNVVSIINLNFFAGSCDYGHWKSGKDLPGLSMSLYPVAIQVGVLLATTIRTVLMNSMGYQADMVVTEAVKSGFINMISYSMAIPLIIAVVIAILY