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NECEvent2014_6_7_scaffold_5833_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 1..735

Top 3 Functional Annotations

Value Algorithm Source
Major Facilitator Superfamily protein n=1 Tax=Clostridium difficile DA00126 RepID=T3M099_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 244.0
  • Bit_score: 465
  • Evalue 4.50e-128
  • rbh
efflux protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 244.0
  • Bit_score: 465
  • Evalue 1.30e-128
Efflux protein {ECO:0000313|EMBL:CKH66538.1}; Putative efflux protein {ECO:0000313|EMBL:CDS83875.1}; Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CDS83770.1}; Transporter, Major similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 244.0
  • Bit_score: 465
  • Evalue 6.20e-128

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 735
GTTATAAGTTGTGTAAGTTTCTTTCTATCTGCAATTATGGAGATATTTATACAGATTCCTTTTATCAAACAAGAGCAAAACAGCAACATTATAAAAACTATATTTACTGATATAAAGGATGGTATTGTTCATATATGTAAAGAAAATAGATTTATACTAAAAATACTTTTTTTAGCTATAGCAATAAACTTATTTTTAAGCTCTATGTTAATAGTTGGTATCCCCTATATAGTAAAAATCACTATGGGAGCTAGTAACTTCTTATATGGTCTAGCAGAAGGAGCAATTTCTTTTAGTTCACTGGTAGCTGCTGTTAGTATTGGTATTTTCTCAAAACATCTAAAAATCACTAATTTGCATATTTCCTTTATTATATGTGCAGTTATGTTCATACCAATGGCGGTTTCAGTATATCCATTTATATTAAACACAGGATTTCCAGTTCCATTTTTAATCTTTATAGTATCATCTATGCTAATATTTTTTACAACGACTCTTATCTCAATATATGTTATAACAGTCACACAATTAAAAACTCCAAATGAACTCTTAGGAAAAGTAATGTCAATTCTTTTTGCAGGAACAGCAATTGCAATGCCCCTTGGTCAGGTTATGTATGGTAAACTTTTTGATTTATTATCAGATAGAGTGTACATCATTATACTAGGAGTTGGATTTATTACATTACTTATAGCATTTGTATCAAAGATAACATTGAGGAACGAAAATCTTTAG
PROTEIN sequence
Length: 245
VISCVSFFLSAIMEIFIQIPFIKQEQNSNIIKTIFTDIKDGIVHICKENRFILKILFLAIAINLFLSSMLIVGIPYIVKITMGASNFLYGLAEGAISFSSLVAAVSIGIFSKHLKITNLHISFIICAVMFIPMAVSVYPFILNTGFPVPFLIFIVSSMLIFFTTTLISIYVITVTQLKTPNELLGKVMSILFAGTAIAMPLGQVMYGKLFDLLSDRVYIIILGVGFITLLIAFVSKITLRNENL*