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NECEvent2014_6_7_scaffold_1510_1

Organism: NECEvent2014_6_7_Klebsiella_oxytoca_55_23_partial

partial RP 19 / 55 MC: 3 BSCG 17 / 51 ASCG 8 / 38 MC: 3
Location: comp(345..2327)

Top 3 Functional Annotations

Value Algorithm Source
RNase E specificity factor CsrD n=3 Tax=Klebsiella oxytoca RepID=H3LUI1_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 660.0
  • Bit_score: 1303
  • Evalue 0.0
  • rbh
RNase E specificity factor CsrD {ECO:0000313|EMBL:EHS90786.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsie similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 660.0
  • Bit_score: 1303
  • Evalue 0.0
regulatory protein CsrD similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 646.0
  • Bit_score: 1243
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1983
ATGTTTATCGGGCACTCATTCACTCGCGGAGTTAACACAGGGATGCGATTAACGACGAAATTCTCAGCCTTTGTCACGTTACTCACCAGCCTGACTATCTTTGTCACGCTGATTGGCGCTTCGCTGAGTTTTTATAACGGTATTCAGATAAAAATGACCAACCGCGTTCAGGCGGTGGCAACGATGCTGGATAACCGCCTGGTCTCTATATCTTTTGACCAGTTAGAACCGCAGATGGATGAGCTGATGACGCCGGTCGAAGTCGTGCACGTTGATTTTCAGCTTAATGGCAAATCAGTCTATAGCCATTCCCGCAACGATAACTATCGTCCGTTAGGCAGCAGCAATCAGTTCCGTAGTATCACCGTGCCGTCGCTCAAGCACCCGGGCATGGTTATCCATCTGGTTTATCTGGATCCGATGGCCAATTATTTCCGTTCGCTGCACGTTACCGCGCCGCTTTCCATCGCCATTGGTTTCATGGTGCTGATTATCTTTTTTTCCGTGCGCTGGATCCGTCGTCAGCTGGCGGGCCAGGAGCTACTGGAGCTTCGCTCTGTGCGTATTCTTAACGGCGAACGCGGCCCGCAGGTGCGCGGGTCGGTACACGAATGGCCAGTCAACACCAGCAGTGCGTTAGATACGCTGCTATCAGAACTGCAGTTTGCCAGCGATCAGCGAAGCCGCATGGATACCCTGATTCGTTCTTACGTTGCGCAGGATTCAAAAACCGGACTCAGTAACCGATTGTTCTTTGATAATCAGCTGTCGACGCTGCTTGAAGATCAGGAGAAGGTGGGGTCGTACGGTATTGTTATGATGATCCGCCTGCCGGATTTCGACCTGCTGCGCGATAACTGGGGGCGTACAGCGACTGAAGAGCATTACTTTACGCTGATCAACATGCTTTCCACCTTTATTATGCGTTATCCCGGCGCGCTGCTGGCCCGCTATCACCGAAGCGATTTTGCCGTTCTGCTCCCTCATCGCACGTTAAAAGAGGCGGATAGCATCGCCGGATTGCTATTGAAGGCTATGGATGCCCTGCCGCCAACGCGAATTCTCGATCGTGACGACATGATGCATATCGGGATCTGCGCCTTCCGTAGCGGACAAACGGCAGCCCAGGTGATGGAGCATGCGGAAGCGGCAACGCGCAATGCGGTATTGCAGGGTAGCAACAGCTGGGCCGTCTACGATGACTCTCTCCCGGAAAAGGGGCGCGGCAACGTCCGCTGGCGCACGCTTATCGAGCAAATGCTCAGCCGCGGCGGACCGCGTCTCTACCAGAAACCTGCCGTAACGCGTGACGGTCGCGTACACCACCGCGAGCTAATGTGTCGTCTTTACGATGGCAAGGAAGAAGTTATCGCGGCGGAATATATGCCGATGGTACTGCAGTTCGGGCTGGCGGAAGAGTATGACCGCCTGCAAATCACCCGGTTGCTGCCGTTTTTAGGCTTCTGGCCGGAAGAAAATCTCGCGCTACAGGTGACGGTTGAGTCATTAATTCGCCCCCGATTCCAGCGCTGGCTGCGCGATACTTTGATGCAATGCGAAAAATCGCAACGTCGGCGTATTATTTTTGAACTTGCAGAGGCGGATGTTTGTCAATATATCGGCCGCCTGCAGCCGGTTATGCGGTTGGTTAATGCTTTAGGTGTTCGAGTTGCCGTAGTTCAGGCTGGTCTGACGCTGGTTGGAACCAGCTGGATTAAGCAGCTCGACGTTGAGGTTATCAAGCTGCATTCGGGGTTATCGCGCAATATAGAAAAACGCAGTGAGAATCAGCTGCTGGTGCAGAGTCTGGTTGAAGCCTGTAAGGGAATGCCGGTTCAGGTTTTCGCAACCGGCGTGCTCAGCCGTAGCGAGTGGCAGGTGCTGTCTCAATGCGGTGTCACCGGCGGTCAGGGGGAATTTTTTGCCGCCTCACAGCCACTTGACACAAATGTGAAAAAATATTCGCAAAGATACTCTGTTTGA
PROTEIN sequence
Length: 661
MFIGHSFTRGVNTGMRLTTKFSAFVTLLTSLTIFVTLIGASLSFYNGIQIKMTNRVQAVATMLDNRLVSISFDQLEPQMDELMTPVEVVHVDFQLNGKSVYSHSRNDNYRPLGSSNQFRSITVPSLKHPGMVIHLVYLDPMANYFRSLHVTAPLSIAIGFMVLIIFFSVRWIRRQLAGQELLELRSVRILNGERGPQVRGSVHEWPVNTSSALDTLLSELQFASDQRSRMDTLIRSYVAQDSKTGLSNRLFFDNQLSTLLEDQEKVGSYGIVMMIRLPDFDLLRDNWGRTATEEHYFTLINMLSTFIMRYPGALLARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICAFRSGQTAAQVMEHAEAATRNAVLQGSNSWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAVTRDGRVHHRELMCRLYDGKEEVIAAEYMPMVLQFGLAEEYDRLQITRLLPFLGFWPEENLALQVTVESLIRPRFQRWLRDTLMQCEKSQRRRIIFELAEADVCQYIGRLQPVMRLVNALGVRVAVVQAGLTLVGTSWIKQLDVEVIKLHSGLSRNIEKRSENQLLVQSLVEACKGMPVQVFATGVLSRSEWQVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV*