ggKbase home page

NECEvent2014_6_7_scaffold_64_53

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(54725..57010)

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial biogenesis outer membrane usher protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QW93_CITFR similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 761.0
  • Bit_score: 1518
  • Evalue 0.0
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX71204.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 761.0
  • Bit_score: 1524
  • Evalue 0.0
fimbrial protein similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 761.0
  • Bit_score: 1396
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2286
ATGGTTTGCGCACAAACGCTGAATAATAACCAGAGTGAGAATGGTGTTATTAATAGCACCTCACAAATTACGGGAGTCGATTTGTATCTCGATGTCACCTTAAATGGGAATCCCGTTGGGCTGGTACATTTTGGCTACGATAATGGAAAGCTTTATGCGGGAGCTAATACCCTGAGTAAAATGGGCTTTCGCTTTGCTCCAGACGCCACTAACGCCGTCTGCCTGAACGATATTCCCCAGTTAACCATTGACTACAACGTTCAGTTGCAAACGCTCTCGCTTGCTGCGCCACTTAGTTCACTCGATCTTGCCACCACGCAGCTTAACTCGCCTACCGAAACCGCGCCAACGGCGACAACATCACGCGGAGCGCTGCTCAATTATGATATCTATACCCAGCAGGGGGATGAGAGCGTAATAAATACCTTCAGTGAACTTCGCGCCTTCAATGCTGCCGGCGTGCTCAGCACCACCCAGTTGACGCAGTACTCCACCGAGAAATACGCCGATAACAGCTTTGAGCGCCTTGATACCAGCTGGCGTACCTCATTTCCTGATACGATGTTGGCGTTAACCGTTGGCGATACCCTGACAAGCTCACTCATCTGGTCCCGACCAACGCGTATCGGCGGCATTCAGATAGGCACCGATTTTGGTTTACAGCCCTATATGCCAACCACCCCGCTCCCTGCATATCTGGGATCCGCGACGTTGCCATCAAACGTTGAGCTGTACGTGGACGGTGTCAGGTACTACAACGGAGAAGTCCCCGCAGGTAGTTTTCAGATCAACACCATGCCTAACATCAGCGGCGCGGGAACGGGTCAGGTGATGATGACAGACGCGCTGGGCAGAACGAGCGTACAAAATTTCTCGTTCTACAACGATCAACAACTCCTGCGGGAAGGATTAACCGCCTGGTCGGCAGAATTGGGCACGGTACGCGAAAATTATGGTTATTCCTCTTTTGACTATGCCAGCGCACCGGTATTGAGCGCTACGTGGCGTCGCGGGTTTAGCAATACGTTGACCGCCGGGGCTCACGCAGAAACCAGCGATGGACTAATTAACGCAGGCTTCAGTAACGACTGGATCCCGGGAACCCGCAGCGGCACATTTTCGACATCACTTGCCGCAAGTAGCGATTCAGGGCAGAACGGATTTCTGTATAGCTTTGGTTATCGTTGGTCCGGCGAACGGTTTAATTTCAGTACCAGTACCACGGCAACTTCTGGCGATTACCGCGATGTCGCCACCCATTATGGTGAGCCGCCCCCAACGCTTAACAGCAACACGGTCATTGGCTATTCGCTGGAATCTGCCGGAAATGTCAGCCTGAGTTATCTGCAGTTTCGTTATCCACACGAAAATGCGATGCGCTACGCCAACGCCAGCTGGTTCAAATCCGTTACAGACAACATCTCACTGAATGCCGGATTCAACCAGAACATTGACGATAACCGCGATCGCAGTATCTATCTGATGGTAACGATTACCACTGATAACAATCTGAGCGCCAGCAGCACGCTACAACGCACCAACGATGAAACCGGCTATCAGCTCAACGCCAGCAAGACGCCGCCTGCCGACGGCGGTTGGGGCTGGAATCTGGCCGCCAGTCAGCAGGCTTCCCGACAAAGTGGCCAGGGAGAAGTAGGATATCTGGGGCGTTATGGTAAAGCGTACGCGGGATTCAGCCGTTTACCAGATAACCATTACGGCTACGCAGGCGCAACCGGATCGCTGGTGACCATGGGAGGCGGCTTGTTTGCAGCAAGGGAAATCAACAATGGTTTTGCCGTCGTCTCAACTGACGGCGTGCCTGATGTTCCAGTCAAACTGCAAAATAACCTGATTGGTCGCAGCGATGACCAGGGACTACTGCTGGTCACGCCGCTCAACAGTTATCAAAAAAACCTGATCAGTATTGACCCGATGGATCTCCCCACCAATATGCGGATCGCACGCGTTGAGACGAATGCCACGCCTGCAGATCGTTCCGGTACTTTGGTTAGTTTTGGCATCACCACCGTACGTGCTGCGCAGGTTATCCTCGTCGACAATCAGGGTAAGCCAATTCCTGAAGGCAGCATGGCTTACGCCATCAACGGAAAAGGACAGTCGTCTGTCGTTGGCTTTGATGGGATGACCTGGTTCGACACACTGGAGCAGCACAACACGCTGCGCGTTGAGACGGACACCGGTAGTTGTCGCGTGCAATTTGACTATCCCGTGTCAGCAAAGGGGATTGTGCAAATAGGCCCGCTGGTTTGTCGCCCACACTAA
PROTEIN sequence
Length: 762
MVCAQTLNNNQSENGVINSTSQITGVDLYLDVTLNGNPVGLVHFGYDNGKLYAGANTLSKMGFRFAPDATNAVCLNDIPQLTIDYNVQLQTLSLAAPLSSLDLATTQLNSPTETAPTATTSRGALLNYDIYTQQGDESVINTFSELRAFNAAGVLSTTQLTQYSTEKYADNSFERLDTSWRTSFPDTMLALTVGDTLTSSLIWSRPTRIGGIQIGTDFGLQPYMPTTPLPAYLGSATLPSNVELYVDGVRYYNGEVPAGSFQINTMPNISGAGTGQVMMTDALGRTSVQNFSFYNDQQLLREGLTAWSAELGTVRENYGYSSFDYASAPVLSATWRRGFSNTLTAGAHAETSDGLINAGFSNDWIPGTRSGTFSTSLAASSDSGQNGFLYSFGYRWSGERFNFSTSTTATSGDYRDVATHYGEPPPTLNSNTVIGYSLESAGNVSLSYLQFRYPHENAMRYANASWFKSVTDNISLNAGFNQNIDDNRDRSIYLMVTITTDNNLSASSTLQRTNDETGYQLNASKTPPADGGWGWNLAASQQASRQSGQGEVGYLGRYGKAYAGFSRLPDNHYGYAGATGSLVTMGGGLFAAREINNGFAVVSTDGVPDVPVKLQNNLIGRSDDQGLLLVTPLNSYQKNLISIDPMDLPTNMRIARVETNATPADRSGTLVSFGITTVRAAQVILVDNQGKPIPEGSMAYAINGKGQSSVVGFDGMTWFDTLEQHNTLRVETDTGSCRVQFDYPVSAKGIVQIGPLVCRPH*