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NECEvent2014_6_7_scaffold_124_7

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(8220..8444)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein CspD n=10 Tax=Citrobacter RepID=C1M6B9_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 158
  • Evalue 3.60e-36
stationary phase/starvation inducible regulatory protein CspD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 158
  • Evalue 1.00e-36
Cold shock domain protein CspD {ECO:0000313|EMBL:KEL81112.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 158
  • Evalue 5.00e-36

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGGAAACGGGTACTGTTAAGTGGTTCAACAACGCCAAAGGGTTTGGTTTCATTTGCCCCGAAGGCGGCGGCGAAGATATTTTCGCCCATTATTCCACCATTCAGATGGATGGTTACAGAACGCTAAAAGCCGGACAGTCTGTCCAGTTTGATGTCCACCAGGGGCCAAAAGGCAATCATGCCAGTGTCATCGTGCCTGTCATTGAAGCAGAAGCTGTCGCATAG
PROTEIN sequence
Length: 75
METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVIEAEAVA*