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NECEvent2014_6_7_scaffold_124_15

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(17186..20266)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance protein MdtC n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1H1Z0_CITFR similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 999.99
  • Bit_score: 1953
  • Evalue 0.0
  • rbh
Multidrug resistance protein MdtC {ECO:0000256|HAMAP-Rule:MF_01424, ECO:0000256|SAAS:SAAS00007749}; Multidrug transporter MdtC {ECO:0000256|HAMAP-Rule:MF_01424}; TaxID=546 species="Bacteria; Proteobac similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 999.99
  • Bit_score: 1950
  • Evalue 0.0
multidrug transporter similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 999.99
  • Bit_score: 1934
  • Evalue 0.0

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3081
ATGAAATTTTTCGCGCTTTTCATTCATCGGCCGGTGGCGACCATTCTCATTTCGGTGGCTATCACCCTGTGCGGTATTCTGGGCTTTCGTCTGCTGCCGGTCGCTCCGCTGCCGCAGGTGGATTTTCCGGTGATTATGGTCAGCGCATCATTACCCGGTGCCTCCCCTGAAACGATGGCGTCTTCGGTCGCAACTCCGCTGGAGCGCTCGCTGGGCCGCATCGCGGGCGTAAACGAAATGACTTCGAGTAGTTCGCTTGGCAGTACGCGTATTATTCTCGAATTCAAATTCGACCGTGACATCAATGGCGCGGCGCGGGACGTTCAGGCCGCGATTAACGCCGCGCAAAGCCTGCTGCCCAGCGGGATGCCGAGCCGACCAACGTATCGCAAAGCTAACCCTTCCGATGCGCCAATCATGATCCTGACGCTGACGTCGGACACTTACTCGCAGGGTGAACTGTACGATTTCGCATCAACACAACTGGCGCAGACCATCGCGCAAATCGACGGTGTGGGCGACGTGGACGTTGGAGGCAGTTCTCTGCCTGCCGTGCGGGTAGGACTCAACCCGCAGGCGCTGTTTAACCAGGGCGTGTCACTGGACGACGTGCGTAGCGCGATCGACAATGCCAACGTGCGTAAGCCGCAGGGCGCTATCGAGAATGATACCCATCGCTGGCAGGTACAAACTAACGATGAGCTGAAAACCGCCGCCGAATATCAACCGATTATCATCCACTATAACAACGGCGCAGCGGTGCGACTGGGTGATGTTGCGTCTATAACCGACTCTGTACAGGACGTTCGTAACGCGGGGATGACCAACGCCAAACCGGCCATTCTGCTGATGATCCGCAAGCTGCCGGAAGCCAATATTATTCAGACGGTAGATAGCATTCGCGCCAAATTACCGGAGCTACAAACGCTGGTCCCGGCCGCCATCGATCTGCAAATCGCCCAGGACCGTTCACCGACCATTCGCGCTTCATTAGAGGAAGTTGAACAGACGCTGATTATCTCCGTGGCGCTGGTTATCCTGGTGGTCTTTGTTTTCCTGCGATCCGGGCGTGCGACTCTGATCCCCGCGGTAGCGGTTCCGGTCTCGCTGATCGGTACCTTTGCCGCCATGTATCTGTGCGGATTCAGCCTGAACAACCTGTCATTGATGGCGTTAACCATTGCCACGGGATTTGTCGTAGATGACGCCATCGTGGTGCTGGAAAATATTGCCCGCCACCTGGAAGCAGGAATGAAGCCACTCCAGGCGGCGTTACAGGGTACGCGCGAAGTGGGATTCACCGTGCTTTCCATGAGCCTGTCGCTGGTGGCGGTATTCCTGCCGCTGCTGTTAATGGGCGGATTGCCTGGACGCCTGCTGCGCGAATTTGCCGTCACGCTGTCGGTTGCCATCGGTATCTCGCTGCTGGTGTCGCTGACATTAACGCCAATGATGTGCGGCTGGATGCTTAAATCCAGCGCCCCGCGTGAACAGCCGCGTAAACGGGGATTTGGTCGCGTGCTGGTAGCGCTGCAGCAAAGCTACAGCACTTCACTTAAATGGGTACTGCGCCACACGCGACTGGTGGGCGTGGTATTACTCGGCACCATTGCGCTGAATATCTGGCTTTATGTTTCCATCCCCAAAACCTTCTTCCCGGAGCAGGATACGGGCGTATTGATGGGAGGGATCCAGGCTGACCAGAGCATCTCTTTCCAGGCGATGCGCGGTAAACTGCAGGATTTTATGAAGATCATCCGCGACGATCCGGCGGTGAACAATGTCACCGGCTTTACCGGTGGGTCACGGGTTAACAGCGGGATGATGTTTATTACCCTCAAGCCCCGCGATGAGCGCCGTGAAACCGCTCAGCAGGTGATCGACCGCCTGCGCGTTGCGCTTTCAAAAGAACCAGGTGCGAATCTGTTTCTGATGGCGGTGCAGGACATCCGCGTTGGCGGACGGCAGGCCAACGCCAGCTATCAATACACATTGCTGTCCGACGATCTGGCGGCGCTGCGTGAGTGGGAACCGAAGATCCGTAAGGCGCTTGCCGCCCTGCCCCAACTGGCGGACGTCAACTCCGATCAGCAGGACAATGGCGCGGAGATGAATCTGATTTACGATCGCGACACCATGTCTCGTCTTGGGATCGACGTGGCGGTCGCCAACAGCCTGCTGAATAACGCCTTTGGTCAGCGACAAATTTCAACCATCTATCAGCCGATGAACCAGTACAAAGTGGTGATGGAGGTCGATCGACGTTACACCCAGGACATCAGCGCGCTGGACAAAATGTTCGTCATCAACAATGAAGGTAAGGCGATCCCGTTATCGTACTTTGCCAAATGGCAGCCAGCGAATGCGCCACTGTCGGTAAACCATCAGGGATTATCTGCCGCCTCAACCGTGTCGTTTAACCTGCCGACAGGTTCTTCACTGTCAGAAGCGACAGAGGCCATCAATAGAACCATGACCCAGCTAGGCGTCCCCTCCACGGTTCGTGGCAGCTTTGCCGGTACCGCCCAGGTATTTCAGGACACGATGAACTCGCAGGTGATCCTGATAATCGCCGCCATCGCCACCGTCTATATCGTGCTGGGTATGCTGTATGAAAGCTATGTACATCCGCTGACCATTCTCTCCACGCTACCTTCGGCAGGGGTCGGGGCTTTGCTGGCGCTGGAGCTGTTCAATGCCCCATTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATTGGAATTGTGAAGAAAAACGCCATCATGATGGTCGATTTTGCGCTGGAAGCGCAGAGAAACGGTAAGCTGCAGCCGGAAGAAGCTATTTTCCAGGCCTGCCTGTTGCGCTTTCGCCCAATCATGATGACCACGCTGGCGGCGTTATTTGGCGCACTGCCGTTAGTGTTATCCGCAGGGGATGGCTCTGAGCTGCGCCAGCCGTTGGGGATAACCATTGTCGGTGGGCTGGTCGTGAGCCAGCTCCTGACGCTGTACACCACGCCTGTGGTCTATCTCTTTTTCGACCGTCTGCGTCTGCGTTTTTCGCGTAAAAACAGCAAACCGGTAGCAGAGTTATGA
PROTEIN sequence
Length: 1027
MKFFALFIHRPVATILISVAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFKFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAQTIAQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRSAIDNANVRKPQGAIENDTHRWQVQTNDELKTAAEYQPIIIHYNNGAAVRLGDVASITDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQTLVPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFVFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKSSAPREQPRKRGFGRVLVALQQSYSTSLKWVLRHTRLVGVVLLGTIALNIWLYVSIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTGGSRVNSGMMFITLKPRDERRETAQQVIDRLRVALSKEPGANLFLMAVQDIRVGGRQANASYQYTLLSDDLAALREWEPKIRKALAALPQLADVNSDQQDNGAEMNLIYDRDTMSRLGIDVAVANSLLNNAFGQRQISTIYQPMNQYKVVMEVDRRYTQDISALDKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTVSFNLPTGSSLSEATEAINRTMTQLGVPSTVRGSFAGTAQVFQDTMNSQVILIIAAIATVYIVLGMLYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGKLQPEEAIFQACLLRFRPIMMTTLAALFGALPLVLSAGDGSELRQPLGITIVGGLVVSQLLTLYTTPVVYLFFDRLRLRFSRKNSKPVAEL*