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NECEvent2014_6_7_scaffold_141_18

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(18561..19346)

Top 3 Functional Annotations

Value Algorithm Source
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=3 Tax=Citrobacter RepID=J0VL67_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 527
  • Evalue 1.00e-146
  • rbh
Membrane protein {ECO:0000313|EMBL:KJC12482.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 527
  • Evalue 1.40e-146
membrane protein similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 261.0
  • Bit_score: 475
  • Evalue 9.90e-132

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGCATGCAATGGACTGGCAGGGAGTGCTGAGCGGGCAACCCCTGCAATGGATAATTTCTGGTTTTCTTACCACGCTTTGGGTGACGCTGGCAGGTATCGTGCTCGCAACGCTCATTGCCATCTCACTGCTCAGCCTGCGACTGACGGGCAATCGTCTCGCTAAAACGATGGTCGGGGTGTGGGTCTCGGTGTTTCGCAATACCCCTTTACTGGTGCAACTGATGTTCTGGTATTTTGCCGCATGGAACTGGCTTCCCCGTGACGTCATTAGCTTCATCAATGCTGATCATCCATGGTCAATTCTGCCGGGTGATGTCTGGTGGTTAACGCCGGAGTTTATCTGTTCAGCATGGGGACTGGGCGTATTTACCTCAGCATTTTTGGTCGAAGAGATCGCCTCAGGTTTACAGGCAGTTTCTGCCGGACAACGCGAGGCTGCCGTGGCGCAGGGGTTTTCATCCTGGGCGATATTTCGTCACATTCTGCTGCCTCAGGGACTGGCAAACGCCTGGCAACCCATTGTTGGGCAATATCTCAACCTGATGAAGCTTTCCTCGCTTGCCAGTGGTATTGGATTTGCTGAGCTCACCTACCAGGTACGGCAAATTGAGAGCTACAACGCGCACGCGCTGGAAGCCTTTGCCGTTGGCACCGCACTCTATCTGTTTACCGGCATCGTGCTGGGTATGTTGCTTACGCGTCTTGGGCCGCGGCCGGCGGCGGGTAAATCGTCAAAGGTAAGAATGCGCATCTTCAGCGTCAGGAGCATACTGCATGATCGCTAA
PROTEIN sequence
Length: 262
MHAMDWQGVLSGQPLQWIISGFLTTLWVTLAGIVLATLIAISLLSLRLTGNRLAKTMVGVWVSVFRNTPLLVQLMFWYFAAWNWLPRDVISFINADHPWSILPGDVWWLTPEFICSAWGLGVFTSAFLVEEIASGLQAVSAGQREAAVAQGFSSWAIFRHILLPQGLANAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLFTGIVLGMLLTRLGPRPAAGKSSKVRMRIFSVRSILHDR*