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NECEvent2014_6_7_scaffold_322_29

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(27903..28424)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FecI n=4 Tax=Citrobacter RepID=J0VW95_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 173.0
  • Bit_score: 337
  • Evalue 5.80e-90
  • rbh
RNA polymerase, sigma 19 factor {ECO:0000313|EMBL:ETX70491.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fre similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 173.0
  • Bit_score: 340
  • Evalue 1.60e-90
RNA polymerase sigma factor FecI similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 173.0
  • Bit_score: 316
  • Evalue 5.10e-84

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGTCTGACCACGCCACTACCACTGCTTCCTTTACGCTCGAGTCGCTTTATGGCGCACATCACGGCTGGCTGAAAAGCTGGCTGACGCGCAAACTCCAGTCCGCCTTTGATGCAGATGACATTGCCCAGGACACTTTTCTACGGGTAATGGGCAGCGGCTCGCTCTCGACGATCCGCGATCCGCGCTCCTTTCTGTGCACTCTCGCTAAACGGGTGATGGTCGACCTGTTTCGTCGAAACGCGCTGGAAAAAGCCTATCTGGAGATGCTGGCGCTTATGCCAGAGGCGCTCGCGCCTTCGCCCGAGGAACGCGAGAGCCAGCTCGAAACCCTGCAACTCATCGACAGCATGCTTGACGGGCTGAACGGAAAAACACGCGAAGCGTTTCTGCTTTCGCAACTGGATGGTCTGACATACAGCGAGATCGCGCTGAAGCTCGGTATCTCCGTCAGCTCGGTGAAAAAATATATGGCAAAGGCTATCGAGCATTGTCTGCTGTTTCGTCTGGAGCACGGCCTGTGA
PROTEIN sequence
Length: 174
MSDHATTTASFTLESLYGAHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMGSGSLSTIRDPRSFLCTLAKRVMVDLFRRNALEKAYLEMLALMPEALAPSPEERESQLETLQLIDSMLDGLNGKTREAFLLSQLDGLTYSEIALKLGISVSSVKKYMAKAIEHCLLFRLEHGL*