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NECEvent2014_6_7_scaffold_475_20

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(24451..24798)

Top 3 Functional Annotations

Value Algorithm Source
sdhD; succinate dehydrogenase (EC:1.3.5.1) similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 115.0
  • Bit_score: 225
  • Evalue 1.00e-56
Succinate dehydrogenase hydrophobic membrane anchor protein n=5 Tax=Citrobacter RepID=J0M2L8_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 227
  • Evalue 5.70e-57
Succinate dehydrogenase cytochrome b-556 subunit {ECO:0000313|EMBL:CDL36398.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 115.0
  • Bit_score: 227
  • Evalue 7.90e-57

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGGTAAGCAACGCCTCCGCATTAGGACGCAACGGCGTACATGACTTCATTCTGGTCCGTGCTACCGCTATCGTTCTGACGTTATACATCATCTTTATGGTCGGTTTCTTCGCCACCAGCGGCGAGCTGACGTATGAAGTCTGGACCGGTTTCTTCTCATCGGCATTCACCAAAGTCTTTACCCTGCTGGCACTTTTCTCCATCTTGATTCATGCCTGGATCGGCATGTGGCAGGTGTTGACCGACTACGTTAAACCTCTGGCTGTGCGCCTGATTCTGCAACTGGCTATCGTTGTTGCGCTGGTGGTTTACGTCATTTATGGATTTGTTGTGGTGTGGGGTGTGTAA
PROTEIN sequence
Length: 116
MVSNASALGRNGVHDFILVRATAIVLTLYIIFMVGFFATSGELTYEVWTGFFSSAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLAVRLILQLAIVVALVVYVIYGFVVVWGV*