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NECEvent2014_6_7_scaffold_747_11

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(10006..10719)

Top 3 Functional Annotations

Value Algorithm Source
Cyclic di-GMP regulator cdgR n=3 Tax=Citrobacter RepID=J0LZN8_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 237.0
  • Bit_score: 466
  • Evalue 1.90e-128
  • rbh
Cyclic di-GMP regulator CdgR {ECO:0000313|EMBL:KJC12541.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 237.0
  • Bit_score: 465
  • Evalue 3.60e-128
cyclic di-GMP regulator CdgR similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 237.0
  • Bit_score: 425
  • Evalue 8.20e-117

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGATTGTTTCACTGGATAATCTTTACCATTCTGAGTTCTCTTTTCTTCCTGCGAGAAGCGAAAAAGGCGATCTTGAATTCGTCGACATCATCACCAATTTCGCCAGTGCACATGGGGATGTGCGTATACCCACCGAGCTGGTCCTACCTCGGATGTCAGACGACGAACAATGTCGTTTATTTGTAGAAAAACTAGAATTAATCGAAACGTGCCAACATTTTTTTATTCAGCGAAAAGTATTTGCCTGGATTAATTTAACGCCAGCAATTGCTAATACTTTATTATCAGATACTGAACTTGCTTCACAAGTTGAACGATTTTCATTTCTGGAGCTGACTATTAATGAAAGCTATCCGGAGTTAAACAAAGGCAAAGATAATCCAACATTGGCCGCACTTGCTGCGCGATTTCCATTAGCCCTGACAAACTATGGTGCTGGCGGTATATCAACCCGGGCAATTTTTGACGGCCTGTTCAAACGCGTCGTTCTGGATAAAAACTTTGTTCAACAAAGGATTGCACATATTTCGTTTGAACCGTTTATGCGGGCTATTCTGGCGCAACTATCTCCCAGTTGTGAGTCAATAATCATTAGCGGAATTGATACACAAGAGATGCTGGAGCGCGTTTTGCCTGTGGGATTCAGTGCCATGCAGGGAGGATTGTGGCCTGCAGTGCCTCCTGCGCAGATAATTTCGCTTGCTAAGATATAA
PROTEIN sequence
Length: 238
MIVSLDNLYHSEFSFLPARSEKGDLEFVDIITNFASAHGDVRIPTELVLPRMSDDEQCRLFVEKLELIETCQHFFIQRKVFAWINLTPAIANTLLSDTELASQVERFSFLELTINESYPELNKGKDNPTLAALAARFPLALTNYGAGGISTRAIFDGLFKRVVLDKNFVQQRIAHISFEPFMRAILAQLSPSCESIIISGIDTQEMLERVLPVGFSAMQGGLWPAVPPAQIISLAKI*