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NECEvent2014_6_7_scaffold_658_6

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(6256..7386)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein RffA n=3 Tax=Citrobacter RepID=J1FZI0_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 376.0
  • Bit_score: 761
  • Evalue 4.60e-217
  • rbh
Lipopolysaccharide biosynthesis protein rffA {ECO:0000313|EMBL:ETX67706.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Ci similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 376.0
  • Bit_score: 758
  • Evalue 5.50e-216
TDP-4-oxo-6-deoxy-D-glucose aminotransferase similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 376.0
  • Bit_score: 742
  • Evalue 6.30e-212

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGATTCCATTTAACGCACCGCCGGTGGTGGGCACTGAACTCGATTACATGCAGGCTGCGATGAACAGCGGCAAACTGTGTGGCGACGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAACAGCATTTTGGCAGCGAGAAAGTATTGCTGACGCCTTCCTGCACCGCATCGCTTGAGATGGCGGCATTGCTGCTGGATATCCAGCCTGGCGATGAAGTCATTATGCCAAGCTATACGTTTGTCTCCACGGCCAATGCTTTCGTGCTGCGAGGCGCGAAAATTGTCTTTGTTGATATCCGCCCGGATACCATGAACATTGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACCCGCGCGATTGTGCCGGTGCATTACGCGGGCGTGGCCTGCGAAATGGATACTATTATGGCGCTGGCGACCAAACATAACCTGTTTGTGGTGGAAGATGCGGCCCAGGGCGTTATGTCGACTTACAAAGGTCGGGCGCTGGGGACGATTGGTCACATCGGTTGCTTTAGCTTTCATGAGACCAAAAACTATACCGCAGGTGGTGAAGGCGGCGCGACGCTGATTAATGATAAAAAATTAGTCGAACGTGCAGAGATCATCCGTGAAAAAGGGACAAACCGTAGCCAGTTTTTCCGTGGCCAGGTAGATAAATATACCTGGCGTGATATCGGCTCCAGCTATTTGATGTCCGATCTACAGGCCGCTTATCTGTGGGCGCAACTGGAAGCAGCGGACCGCATTAACCAGCAGCGTCTGACTCTGTGGCAGAACTACTATGATGCTCTTGAACCGCTGGCGCGTACCGGACGTATCGAGCTGCCTTCTGTACCGGACGACTGCGTGCAAAACGCCCATATGTTTTACATCAAGCTGCGCGATATCGACGATCGCACGGCGTTGATTAACTTCCTGAAAGAAGCTGAAATTATGGCGGTGTTCCACTATATCCCGCTGCATGATTGCCCGGCTGGCGACAAATTCGGCGTATTTGCCGGTGTTGATCGTTACACCACCAAAGAGAGCGAGCGTTTGCTGCGTTTACCGTTGTTCTACAACCTGTCGCCGGTCAACCAGCGAACGGTAATTTCGACCTTACTCAACTACTTCGCCTGA
PROTEIN sequence
Length: 377
MIPFNAPPVVGTELDYMQAAMNSGKLCGDGGFTRRCQQWLEQHFGSEKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKTRAIVPVHYAGVACEMDTIMALATKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKKLVERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLTLWQNYYDALEPLARTGRIELPSVPDDCVQNAHMFYIKLRDIDDRTALINFLKEAEIMAVFHYIPLHDCPAGDKFGVFAGVDRYTTKESERLLRLPLFYNLSPVNQRTVISTLLNYFA*