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NECEvent2014_6_7_scaffold_658_14

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(14874..16133)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=545 species=" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 820
  • Evalue 1.30e-234
Transcription termination factor Rho n=16 Tax=Enterobacteriaceae RepID=A8ACT5_CITK8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 820
  • Evalue 9.40e-235
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 419.0
  • Bit_score: 820
  • Evalue 2.60e-235

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Taxonomy

Citrobacter koseri → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGCCTTGAAAACCTGGCTCGTATGCGCAAGCAGGACATTATTTTTGCCATCCTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGACGGTGTGCTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGCTCTGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCTCCCAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATTTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTACTTTGCGCTGTTGAAAGTTAACGAAGTTAACTACGACAAACCAGAAAACGCCCGTAACAAAATCCTCTTTGAGAACTTAACGCCGCTGCACGCAAACTCCCGTCTGCGTATGGAGCGTGGTAACGGTTCTACTGAAGACTTAACGGCGCGTGTACTGGATCTGGCATCGCCGATCGGTCGTGGCCAACGTGGCCTGATTGTTGCTCCGCCGAAAGCGGGTAAAACCATGCTGCTGCAGAACATCGCGCAGAGCATTGCATACAATCATCCTGACTGCGTGTTGATGGTGCTGCTGATTGACGAACGTCCGGAAGAAGTTACCGAGATGCAGCGTCTGGTGAAAGGTGAAGTGGTTGCGTCTACCTTTGACGAACCTGCCTCCCGCCATGTTCAGGTTGCGGAAATGGTTATCGAGAAGGCGAAACGTCTGGTTGAACACAAGAAAGACGTTATCATTCTGCTTGACTCCATCACCCGTCTGGCACGTGCATATAACACCGTGGTTCCTGCTTCCGGTAAAGTACTGACCGGTGGTGTGGACGCCAACGCCCTGCATCGTCCGAAGCGTTTCTTTGGTGCTGCACGTAACGTGGAAGAGGGCGGTAGCCTGACCATCATCGCGACTGCGCTGATTGATACCGGCTCTAAAATGGATGAAGTTATCTACGAAGAGTTTAAAGGTACCGGCAACATGGAACTGCATCTCTCCCGTAAGATTGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACCACCCAGGAAGAGCTGCAGAAAATGTGGATCCTGCGCAAAATCATCCATCCTATGGGTGAAATCGACGCAATGGAATTCCTCATTAACAAACTGGCGATGACCAAGACCAATGACGACTTCTTCGATATGATGAAGCGTTCCTGA
PROTEIN sequence
Length: 420
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS*