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NECEvent2014_6_7_scaffold_957_4

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(2354..3079)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional repressor UxuR n=7 Tax=Enterobacteriaceae RepID=K8QSF8_CITFR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 487
  • Evalue 1.10e-134
  • rbh
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EIQ53022.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 487
  • Evalue 1.50e-134
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 241.0
  • Bit_score: 478
  • Evalue 8.30e-133

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGATCCGCGATCTGATTGTCCAGACGCCGTACCAGCCCGGTGAACGCTTGCCGCCAGAGCGTGAAATTGCCGAGATGCTCAATGTCACTCGCACGGTAGTTCGCGAAGCGTTAATCATGCTGGAAATTAAAGGCCTGGTGGACGTGCGCCGCGGAGCCGGGATCTACGTGCTCGACAATGCGGATGCGCAGACTATCGACAGTACGGATGCAAATCATTGCAATGATGCGGGCCCGTTTGAACTGTTGCAGGCGCGACAGCTGCTGGAAAGCAACATTGCCGAATTTGCCGCGCTGCAGGCTACCCGCGAAGATATCGTCAAAATGCGCCAGGCGTTGCAACTGGAAGAGCGGGAGCTGGCTTCCAGCGAGCCAAACGGTTCTGAAAGCGGCGACATGCAGTTCCATCTCGCCATAGCTGAAGCCACGCATAACAGCATGCTGGTGGAGCTGTTTCGCCAGTCATGGCAGTGGCGTGAGAACAACCCGATGTGGATCCAGCTCCATAGCCACCTCGACGATACCCACTACCGGAAAGAGTGGATGGGCGACCATAAACAGATCCTGGCTGCATTAATCAAAAAAGATGCCCGCGCGGCCAAGCTGGCCATGTGGCAGCATCTGGAAAATGTCAAACAGCGTCTGCTGGAGTTTTCAAATGTCGATGACATTGATTTTGATGGTTATCTGTTTGATTCCTGGCCGCTGGATAAAGTTAACGCCTGA
PROTEIN sequence
Length: 242
MIRDLIVQTPYQPGERLPPEREIAEMLNVTRTVVREALIMLEIKGLVDVRRGAGIYVLDNADAQTIDSTDANHCNDAGPFELLQARQLLESNIAEFAALQATREDIVKMRQALQLEERELASSEPNGSESGDMQFHLAIAEATHNSMLVELFRQSWQWRENNPMWIQLHSHLDDTHYRKEWMGDHKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDDIDFDGYLFDSWPLDKVNA*