ggKbase home page

NECEvent2014_6_7_scaffold_5338_2

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(490..1197)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=8 Tax=Citrobacter RepID=C1MGC3_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 449
  • Evalue 1.90e-123
  • rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freund similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 449
  • Evalue 2.60e-123
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 235.0
  • Bit_score: 443
  • Evalue 2.90e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGCTAAACTGACCAAGCGTATGCGCGTGATCCGTGACAAAGTTGATGCAACTAAACAGTACGACATCAACGAAGCTATTGCTCTGCTGAAAGAGCTGGCCACTGCTAAATTCGTAGAAAGCGTAGACGTTGCCGTTAACCTCGGCATCGATGCTCGTAAATCTGACCAGAACGTACGTGGTGCAACTGTACTGCCGCACGGTACTGGCCGTTCCGTTCGCGTAGCCGTATTTGCCCAGGGCGCAAACGCTGAAGCTGCTAAAGCTGCAGGCGCTGAGCTGGTAGGTATGGAAGATCTGGCTGACCAGATCAAGAAAGGCGAAATGAACTTTGACGTTGTTATTGCTTCCCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGCCCGCGCGGCCTGATGCCAAACCCGAAAGTTGGTACTGTAACCCCTAACGTTGCTGAAGCGGTTAAGAACGCTAAAGCAGGTCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCATACCACCATCGGTAAAGTGGATTTTGACGCTGACAAACTGAAAGAAAACCTGGAATCTCTGCTGGTTGCGCTGAAAAAAGCGAAACCGACTCAGGCTAAAGGCGTGTACATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCTGGTGTTGCCGTTGATCAGTCCGGTCTGACTGCGACTGTGGCGAACTAA
PROTEIN sequence
Length: 236
MAKLTKRMRVIRDKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFAQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLESLLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQSGLTATVAN*