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NECEvent2014_6_7_scaffold_745_4

Organism: NECEvent2014_6_7_Clostridium-rel_29_71_hint

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(2999..3349)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EOR26568.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EOR26568.1};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 112.0
  • Bit_score: 114
  • Evalue 9.80e-23
RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 110.0
  • Bit_score: 108
  • Evalue 1.10e-21
RNA polymerase factor sigma-70 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBC1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 112.0
  • Bit_score: 114
  • Evalue 7.10e-23

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 351
ATGAAAATAGATGAAAAGAATTATTTAAAACAGCTCTGTAATAAAAATGAAAAAGCCTTAGAGTATGTTATAGATAACTATTCTGCTATTGTAAATGTAGTAATAAGAAATGTATTAAGATCTTTCGAGAATGAAGGTTTAATAGAAGAATGTATTTCAGATGTATTCTTTAGTGCTTTGGATAATATACATAAATTTAAAGGAGATGACAATAACTTCAAAAATTGGATAGATGGAATTAATAAGTATAAGGCTATAGATTATTATAGAAAATATAGCCATGAGAAATATAGAACTAGTGATATAGAAAACCATGTTATACAAGATAAGATTTTAATAGGGAATATATAA
PROTEIN sequence
Length: 117
MKIDEKNYLKQLCNKNEKALEYVIDNYSAIVNVVIRNVLRSFENEGLIEECISDVFFSALDNIHKFKGDDNNFKNWIDGINKYKAIDYYRKYSHEKYRTSDIENHVIQDKILIGNI*