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NECEvent2014_6_7_scaffold_1341_3

Organism: NECEvent2014_6_7_Clostridium_paraputrificum_30_154

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: comp(2575..2883)

Top 3 Functional Annotations

Value Algorithm Source
celC.2; PTS system cellobiose-specific transporter subunit IIA (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 98.0
  • Bit_score: 117
  • Evalue 2.70e-24
PTS system, Lactose/Cellobiose specific IIA subunit n=2 Tax=Atopobium vaginae RepID=F1T5I7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 101.0
  • Bit_score: 119
  • Evalue 1.90e-24
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EGF23132.1}; TaxID=525256 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 101.0
  • Bit_score: 119
  • Evalue 2.70e-24

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Taxonomy

Atopobium vaginae → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGGATCAAGAATTAATAGCACTAAATTTAATATCAAACTCTGGAACAGCAAGAACAAAGGCATTTGAAGCACTTCACAAGGCAAGAGAAGGAAAATATGAAGAAGCTAAAATTTTATTAAAAGAATCTGAAGAAAGTTCTTTACTTGCCCATAATGCACAAACCGAGTTATTACAAGCAGAGGCGAATGGAGATAATTCTAATTACAGTATTATTATGGTTCATGCTCAAGATCATTTAATGACATCCATTTTAGCTAAAGAGTTAATAGAAGAGATGGTAACAATGTATAAAGAATTGAAAAAATAA
PROTEIN sequence
Length: 103
MDQELIALNLISNSGTARTKAFEALHKAREGKYEEAKILLKESEESSLLAHNAQTELLQAEANGDNSNYSIIMVHAQDHLMTSILAKELIEEMVTMYKELKK*