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NECEvent2014_7_1_scaffold_634_2

Organism: NECEvent2014_7_1_Bifidobacterium_breve_59_10

near complete RP 52 / 55 MC: 7 BSCG 49 / 51 ASCG 12 / 38
Location: comp(1036..2454)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=4 Tax=Bifidobacterium breve RepID=D4BS84_BIFBR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 472.0
  • Bit_score: 923
  • Evalue 6.80e-266
  • rbh
RNA polymerase principal sigma factor hrdB similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 472.0
  • Bit_score: 922
  • Evalue 4.30e-266
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium br similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 472.0
  • Bit_score: 922
  • Evalue 2.10e-265

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Taxonomy

Bifidobacterium breve → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
TTGGCCACGAAGGAAACGACGGCAACCAAGCAGACAGCCGAGTCCAGCGAGGAGACCGAGACCAAGAAGAAGGCCAGCTCTACCACCGCGCGTAAGACCTCCGCCAAGAAGACCAAGGCCACGAAGGGCACCACGGCTGCCAAGACCGGTGAGAAGACTTCACGTAAGACTTCGGCCAAGAAGGTCAAGAAAGAGGAGGAGCTTCCTCAGAATGACATCAGCCAAAGCGATGACCCGGAAGATCTTGACGTCGATAACCTTGATGAGGATCTTGACGACGTCGAATCCGAGGACGTCGATGATCTTGAAGATGCCGATGCCGAGTCGGACGACGAAGACATTGACGATGAGGATGACGAAGACGAGGAAGACGAAGGCAAGGCCGCATCGAAGGCTCCTGAGCAGCCCAAGGAGAAGGGTGCTTATGTGGTTTCCGACACGGATGATGAAGAAGAGAACATCATCCCCGCCGGCAATCCGAAGCGTCGTGTGATTGCGGCAGGCGCCACCGCCGACCCGGTCAAGGACTACCTCAAGCAGATTGGTCGCGTCAGCCTGTTGAACGCCGAACAGGAAGTTGACCTGTCCGAGCGCATCGAGGCCGGCCTGTACGCCCAGCATCTGCTCGATACCGAAAGTGAAGGCATGGAGTTCAAGCGCAAGCGTGAACTCAAGTGGGCCGCCGCCGACGGCAAAAAGGCCAAGGATCATCTGCTGGAGGCCAACCTGCGACTCGTGGTCTCGCTTGCCAAGCGCTATACCGGCCGCGGCATGCTGTTCCTCGATTTGATTCAGGAAGGCAACCTTGGTCTGATTCGTGCCGTCGAGAAGTTCGATTGGAAGAAGGGCTTCAAGTTCTCCACCTACGCCACGTGGTGGATTCGTCAGGCCATTACCCGTGCTATGGCCGATCAGGCCCGTACCATTCGTGTGCCCGTGCACATGGTCGAAGTGATCAACAAGCTGAGCCGTGTGCAGCGCCAGATGCTGCAGGATCTGGGCCGTGAGCCTACGCCGGACGAGCTGGCCCGCGAGCTGGACATGCCGGTCGAAAAGGTGCAGGAAGTGCAGAAGTACGGCCGCGAGCCGATTTCCCTGCACACCCCGCTCGGTGAGGACGGCGATTCCGAGTTCGGCGATCTCATCGAGGATACCGATGCCATTGCTCCGTCCGATGCAGTGGCGTTTTCCCTGCTGCAGGAGCAGTTCAAGCAGGTGCTGGAAACCCTGTCTCCGCGTGAGGCCGGTGTGATCAAGATGCGTTACGGTTTGGAGGACGGCCAGCCGAAGACCTTGGACGATATTGGCCGTGTATATGGCGTGACCCGAGAGCGTATCCGCCAGATCGAATCCAAGACCATGTCCAAGTTGCGCCACCCGTCCCGTTCGCAGACCCTGCGCGACTTCCTGGATCAATGA
PROTEIN sequence
Length: 473
LATKETTATKQTAESSEETETKKKASSTTARKTSAKKTKATKGTTAAKTGEKTSRKTSAKKVKKEEELPQNDISQSDDPEDLDVDNLDEDLDDVESEDVDDLEDADAESDDEDIDDEDDEDEEDEGKAASKAPEQPKEKGAYVVSDTDDEEENIIPAGNPKRRVIAAGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTESEGMEFKRKRELKWAAADGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ*