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NECEvent2014_7_1_scaffold_76_22

Organism: NECEvent2014_7_1_Citrobacter_KTE32-rel_52_45_partial

partial RP 19 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(24955..26388)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 477.0
  • Bit_score: 926
  • Evalue 3.90e-267
RNA polymerase sigma-54 factor n=2 Tax=Citrobacter RepID=R8V8S6_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 477.0
  • Bit_score: 931
  • Evalue 2.50e-268
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 477.0
  • Bit_score: 931
  • Evalue 3.50e-268

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Taxonomy

Citrobacter sp. KTE151 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAAGCAAGGTTTGCAACTCAGGCTTAGCCAACAACTGGCGATGACGCCTCAGCTACAACAGGCTATCCGTCTGTTGCAGCTGTCCACGCTGGAACTTCAGCAAGAACTTCAGCAAGCGCTGGAAAGTAACCCACTGCTCGAGCAAACCGATCTTCACGACGAAATTGATACCCAGGAAAAACAGGACAGCGAATCCCTCGACACCGCAGATGCTCTCGAACAAAAAGAGATGCCAGAGGAGCTGCCGCTTGACGCCAGTTGGGATGAAATTTACACCGCCGGTACGCCTTCTGGCACCAGCGGGGATTACATCGACGACGAACTGCCTGTGTATCAGGGTGAGACCACGCAATCGCTGCAGGATTACCTGATGTGGCAAGTGGAGCTGACCCCGTTCTCGGATACCGATCGCGCAATTGCGACATCCATTGTTGATGCGGTAGACGAAACCGGTTATCTCACCGTAACCCTGGACGATATTCTCGAAAGCATGGGCGATGAAGACGTCGGTATGGACGAAATCGAAGCCGTGCTTAAACGCATTCAGCGTTTTGATCCCGTGGGCGTGGCGGCCAAAGATCTCCGCGACTGCTTACTGATCCAACTTTCACAGTTTGATAAAGCCACGCCGTGGCTGGAAGAAGCGCGCCTGATCATCAGCGATCACCTCGATCTGTTAGCCAACCATGACTTCCGCACGCTGATGCGCGTAACCCGGCTGAAAGAAGATGTGCTGAAAGAAGCCGTCAATCTTATTCAGTCCCTGGACCCCAGACCTGGGCAGTCTATCCAGACCGGGGAGCCAGAATACGTTATTCCGGATGTACTGGTGCGTAAGCATAACGATCGCTGGGTGGTCGAACTCAACGGCGACAGCATTCCACGGCTGCAGATTAACCAGCACTACGCCGCCATGTGCAACAGCGCGCGCAACGACGCTGACAGCCAGTTTATTCGTAGCAATCTGCAGGATGCAAAGTGGCTGATTAAAAGCCTGGAAAGTCGCAATGATACGCTGCTGCGCGTCAGTCGCTGTATCGTTGAACAGCAGCAAGCCTTCTTTGATCAAGGCGAAGAGTTTATGAAACCGATGGTGCTGGCGGATATCGCCCAGGCCGTCGAGATGCACGAATCGACCATTTCCCGAGTGACCACGCAAAAGTATCTGCACAGTCCGCGCGGCATTTTTGAATTGAAGTATTTCTTTTCCAGTCACGTTAACACTGAAGGCGGAGGCGAAGCCTCATCCACAGCTATACGTGCGCTGGTGAAGAAATTAATTGCTGCGGAAAACCCCGCGAAACCGCTGAGTGACAGCAAGTTAACCTCTATGCTGTCAGAACAGGGTATCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCGAACCAGCGCAAACAGCTGGTCTGA
PROTEIN sequence
Length: 478
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEIDTQEKQDSESLDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQSLQDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVTLDDILESMGDEDVGMDEIEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKATPWLEEARLIISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNDRWVVELNGDSIPRLQINQHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFDQGEEFMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV*