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NECEvent2014_7_1_scaffold_216_23

Organism: NECEvent2014_7_1_Citrobacter_KTE32-rel_52_45_partial

partial RP 19 / 55 MC: 4 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(17805..20267)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1169322 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 820.0
  • Bit_score: 1632
  • Evalue 0.0
Ribonuclease R n=2 Tax=Citrobacter RepID=R8VLR0_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 820.0
  • Bit_score: 1632
  • Evalue 0.0
  • rbh
exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 820.0
  • Bit_score: 1618
  • Evalue 0.0
  • rbh

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Taxonomy

Citrobacter sp. KTE151 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2463
ATGTCACAAGATCCTTTCCAGGAACGCGAAGCAGAAAAATACGCGAATCCTATCCCGAGCCGGGAATTTATCCTCGAACATTTAACTAAACGTGAAAAACCGGCCAACCGCGATGAGCTGGCCGCTGAACTCAACATTGAAGGTGAAGAGCAGCAAGAAGCGCTGCGTCGCCGCCTGCGCGCCATGGAACGTGACGGGCAACTGGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAGCGTCTTGACCTGCTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGCGTTGAAGGCCGCAAAGATGATCTGTACCTGTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGTTGGCACAGCCGCTGGGCGCGGACCGTAAAGGTCGTCGCGAAGCGCGTATTGTGCGCGTACTGGTGCCGAAAACCAGCCAGATTGTCGGTCGCTACTTCACCGACGCTGGCGTTGGGTTTGTCGTCCCTGACGACAGCCGCCTGAGCTTTGATATCCTGATCCCGCCGGAAGAGGTGATGGGTGCTCGTATGGGTTTTGTGGTCGTGGTTGAGCTGACCCAGCGTCCGACGCGTCGCACTAAAGCGGTGGGTAAAATTGTTGAAGTCCTGGGCGACAACATGGGAACCAGCATGGCCGTTGATATGGCGCTGCGTACTCATGAAATCCCGTATATCTGGCCTCAGGCCGTCGAAAAACAGGTCGCCGGACTGAAAGAAGAAGTGCCGGAAGAAGCGAAAGCCGGACGTGTCGATCTGCGCTCCCTGCCGCTGGTCACTATCGATGGCGAAGATGCGCGTGACTTCGACGATGCGGTTTACTGCGAGAAGAAACGCGGCGGCGGCTGGCGTTTATGGGTGGCGATTGCTGACGTAAGCTATTACGTTCGCCCGCCGACTCCGCTGGACCAGGAAGCGCGCAGCCGTGGCACATCCGTCTACTTCCCATCGCAGGTTGTTCCGATGCTACCGGAAGTGCTGTCTAACGGATTGTGTTCGCTCAACCCGCAGGTGGACAGGCTGTGTATGGTCTGTGAAATGACCATTTCGTCGAAAGGCCGCTTAACAGGCTTTAAATTCTACGAAGCGGTTATGAGCTCCCATGCGCGTCTGACCTACACCAAGGTCTGGCACATGCTGCAGGGCGATCAGGAACTGCGTGAGCAGTACGCGCCGTTGGTTAAACACATTGAAGAGCTGCATAACCTCTACAAAGTGCTGGATAAAGCGCGTGAAGAGCGTGGCGGTATCTCGTTTGAAAGTGAAGAAGCGAAGTTTATCTTCAATGCTGAACGCCGTATTGAGCGTATTGAGCAGACGCAGCGTAATGACGCGCACAAACTGATTGAAGAGTGCATGATCATGGCGAACATCTCAGCGGCGCGATTCGTTGAGAAAGCCAAAGAGCCGGCACTGTTCCGTATTCACGATAAGCCGACGACCGAAGCGATTAATTCGTTCCGTTCGGTGTTGGCGGAGCTGGGGCTGGAGCTGCCCGGCGGTAATAAACCCGAGCCGCGTGATTACGCTGAACTGCTGGAGTCGATTGCTGACCGTCCTGACGCAGAAATGCTGCAAACTATGCTGCTGCGTTCAATGAAGCAGGCGATTTACGATCCGGAAAACCGCGGTCACTTTGGCCTTGCGTTGCAATCTTATGCACACTTCACCTCGCCGATCCGTCGTTACCCGGATCTCTCCTTGCACCGGGCGATTAAGTATCTGCTGGCGCAGGAGCAGGGCCATAAAGGCAACACCACGGAAACGGGTGGCTACCATTATTCGATGGAAGAGATGCTGCAGCTGGGTCAACACTGTTCGATGGCCGAGCGCCGTGCTGACGAAGCCACACGCGACGTCTCTGACTGGCTGAAGTGCGACTTCATGCTGGATCAGGTAGGTAATGTCTTCAAAGGCGTGATCGCCAGCGTGACCGGGTTTGGTTTCTTCGTCCGTCTTGATGAGCTGTTTATCGACGGTCTGGTGCATGTCTCCTCCCTGGATAACGACTACTATCGTTTTGACCAGGTTGGGCAGCGTCTGACGGGAGAATCCAGCGGTCAAATGTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTGGAAGCGGTCAACATGGACGAGCGTAAAATCGACTTCAGTTTGATCTCCAGCGAACGTGCACCGCGCAATGAAGGTAAAACCGCGCGTGAAAAAGCGAAAAAAGGCGATGCGGGTAAAAATACCGGTAAGCGTCGTCAGATGGGCAAAAAAGTGAATTTCGAGCCGGATAGCGCTTTCCGCGGCGAGAAGAAAGGCAGAGCCAAACCTCAGGCGGATAAAAAAACGGCTGAGAAGAAAGGCGATAAAAAAGCGAAAAAACCATCGGCAAAAACGCTTAAAATCGCTGCCGCCACCAAAGCTAAACGCGCGACGAAAAAGAAAGTCGCGCAATAA
PROTEIN sequence
Length: 821
MSQDPFQEREAEKYANPIPSREFILEHLTKREKPANRDELAAELNIEGEEQQEALRRRLRAMERDGQLVFTRRQCYALPERLDLLKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTDAGVGFVVPDDSRLSFDILIPPEEVMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTSMAVDMALRTHEIPYIWPQAVEKQVAGLKEEVPEEAKAGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDQEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTISSKGRLTGFKFYEAVMSSHARLTYTKVWHMLQGDQELREQYAPLVKHIEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMIMANISAARFVEKAKEPALFRIHDKPTTEAINSFRSVLAELGLELPGGNKPEPRDYAELLESIADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAQEQGHKGNTTETGGYHYSMEEMLQLGQHCSMAERRADEATRDVSDWLKCDFMLDQVGNVFKGVIASVTGFGFFVRLDELFIDGLVHVSSLDNDYYRFDQVGQRLTGESSGQMYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNEGKTAREKAKKGDAGKNTGKRRQMGKKVNFEPDSAFRGEKKGRAKPQADKKTAEKKGDKKAKKPSAKTLKIAAATKAKRATKKKVAQ*