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NECEvent2014_7_1_scaffold_3340_1

Organism: NECEvent2014_7_1_Cronobacter_sakazakii_rel_56_5_partial

partial RP 1 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(3..473)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional activator RhaR n=1 Tax=Cronobacter sakazakii 680 RepID=K8D769_CROSK similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 157.0
  • Bit_score: 314
  • Evalue 6.20e-83
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 157.0
  • Bit_score: 312
  • Evalue 5.10e-83
HTH-type transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; L-rhamnose operon transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; TaxID=1208663 species="Bacteria; Proteoba similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 157.0
  • Bit_score: 312
  • Evalue 2.60e-82

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Taxonomy

Cronobacter sakazakii → Cronobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GTGGCAGGTCAGCTGATTCTTCGCAAAGATGAATTTTTTGCCTCTCCCGCTCAGGCGGTGGCGGTGGCGGATCGCTATCCGCAAAACGTCTTCGCCGAGCACACCCATGAGTTCTGCGAACTGGTGCTGGTGTGGCGCGGCAACGGGCTGCATGTGCTGAATGACAGGCCTTACCGCATCACCTGCGGCGATCTCTTTTATATCCGCGCCGAAGACCGCCACAGCTACCAGTCGGTTAACGATCTGGTGCTACATAACATCATCTACTGCCCCGAACGCCTGCAACTGAACGTCAACTGGCGCGATCTGCTTGAAAACCCGCGCGGCGTGAACGGCGACCCGCGCTGGCGGCTCAGCAGCCAGGGCATGGTGCAGGCGCGTCAGGTGATTGACCAGCTTGAGCATGAAAGCCCGAAGCAAGACGCGCTCTCGCACTGCCTGGCCGAAAGCCTCTTTTTACAGCTGGCGATT
PROTEIN sequence
Length: 157
VAGQLILRKDEFFASPAQAVAVADRYPQNVFAEHTHEFCELVLVWRGNGLHVLNDRPYRITCGDLFYIRAEDRHSYQSVNDLVLHNIIYCPERLQLNVNWRDLLENPRGVNGDPRWRLSSQGMVQARQVIDQLEHESPKQDALSHCLAESLFLQLAI