ggKbase home page

NECEvent2014_7_1_Enterobacter_cloacae-rel_55_27_partial

NECEvent2014_7_1_Enterobacter_55_21
In projects: NECEvent2014_7_1

Consensus taxonomy: Enterobacter  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Many fragmented SCG.

Displaying items 51-100 of 658 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_7_1_scaffold_280 177_001_scaffold_280
Genus: Enterobacter (57.89%)
19 18651 bp 55.04 16.71 90.37
NECEvent2014_7_1_scaffold_283 177_001_scaffold_283
Species: Lelliottia amnigena (52.63%)
19 18587 bp 56.01 16.97 92.29
NECEvent2014_7_1_scaffold_308 177_001_scaffold_308
Genus: Enterobacter (57.89%)
19 17243 bp 52.18 13.91 87.81
NECEvent2014_7_1_scaffold_322 177_001_scaffold_322
Genus: Enterobacter (73.68%)
19 16846 bp 55.66 14.39 90.34
NECEvent2014_7_1_scaffold_376 177_001_scaffold_376
Order: Enterobacteriales (50%)
18 15135 bp 44.63 37.37 85.79
NECEvent2014_7_1_scaffold_423 177_001_scaffold_423
Genus: Enterobacter (83.33%)
18 13877 bp 54.41 16.28 88.79
NECEvent2014_7_1_scaffold_314 177_001_scaffold_314
Species: Lelliottia amnigena (61.11%)
18 17101 bp 54.31 16.40 84.49
NECEvent2014_7_1_scaffold_335 177_001_scaffold_335
Order: Enterobacteriales (94.12%)
17 16462 bp 55.69 16.60 90.77
NECEvent2014_7_1_scaffold_375 177_001_scaffold_375
Species: Lelliottia amnigena (52.94%)
17 15157 bp 57.58 15.23 94.91
NECEvent2014_7_1_scaffold_417 177_001_scaffold_417
Order: Enterobacteriales (94.12%)
17 14096 bp 54.31 14.59 89.01
NECEvent2014_7_1_scaffold_419 177_001_scaffold_419
Species: Enterobacter sp. 35683 (70.59%)
17 13977 bp 56.59 13.68 90.73
NECEvent2014_7_1_scaffold_257 177_001_scaffold_257
Species: Enterobacter sp. 35683 (94.12%)
17 20088 bp 54.41 14.11 95.36
NECEvent2014_7_1_scaffold_261 177_001_scaffold_261
Genus: Enterobacter (58.82%)
17 19879 bp 55.80 14.80 90.05
NECEvent2014_7_1_scaffold_334 177_001_scaffold_334
Genus: Enterobacter (62.5%)
16 16468 bp 54.56 13.55 83.87
NECEvent2014_7_1_scaffold_342 177_001_scaffold_342
Species: Lelliottia amnigena (50%)
16 16245 bp 53.06 15.19 87.93
NECEvent2014_7_1_scaffold_365 177_001_scaffold_365
Species: Lelliottia amnigena (50%)
16 15522 bp 59.37 13.65 94.16
NECEvent2014_7_1_scaffold_401 177_001_scaffold_401
Genus: Enterobacter (50%)
16 14454 bp 55.02 23.77 89.86
NECEvent2014_7_1_scaffold_403 177_001_scaffold_403
Genus: Enterobacter (75%)
16 14369 bp 57.82 15.49 93.93
NECEvent2014_7_1_scaffold_406 177_001_scaffold_406
Species: Enterobacter cloacae (62.5%)
16 14336 bp 47.36 17.79 89.15
NECEvent2014_7_1_scaffold_430 177_001_scaffold_430
Species: Lelliottia amnigena (50%)
16 13621 bp 53.43 14.62 85.63
NECEvent2014_7_1_scaffold_447 177_001_scaffold_447
Genus: Enterobacter (56.25%)
16 13165 bp 50.76 13.40 80.55
NECEvent2014_7_1_scaffold_248 177_001_scaffold_248
Species: Lelliottia amnigena (50%)
16 20580 bp 56.09 15.10 92.07
NECEvent2014_7_1_scaffold_259 177_001_scaffold_259
Species: Lelliottia amnigena (56.25%)
16 19940 bp 56.69 16.33 93.52
NECEvent2014_7_1_scaffold_545 177_001_scaffold_545
Species: Lelliottia amnigena (50%)
16 11178 bp 53.66 12.17 88.38
NECEvent2014_7_1_scaffold_292 177_001_scaffold_292
Genus: Enterobacter (56.25%)
16 18209 bp 59.54 13.14 93.42
NECEvent2014_7_1_scaffold_307 177_001_scaffold_307
Genus: Enterobacter (81.25%)
16 17302 bp 56.78 17.91 91.69
NECEvent2014_7_1_scaffold_326 177_001_scaffold_326
Species: Lelliottia amnigena (50%)
16 16732 bp 54.48 17.10 88.07
NECEvent2014_7_1_scaffold_602 177_001_scaffold_602
Genus: Enterobacter (80%)
15 10280 bp 54.67 15.74 94.32
NECEvent2014_7_1_scaffold_352 177_001_scaffold_352
Genus: Enterobacter (73.33%)
15 16050 bp 55.84 15.64 92.71
NECEvent2014_7_1_scaffold_354 177_001_scaffold_354
Genus: Enterobacter (66.67%)
15 15880 bp 54.69 14.76 89.00
NECEvent2014_7_1_scaffold_387 177_001_scaffold_387
Order: Enterobacteriales (93.33%)
15 14891 bp 51.53 14.98 85.68
NECEvent2014_7_1_scaffold_426 177_001_scaffold_426
Species: Lelliottia amnigena (60%)
15 13801 bp 55.52 15.78 90.17
NECEvent2014_7_1_scaffold_459 177_001_scaffold_459
Species: Lelliottia amnigena (60%)
15 12940 bp 55.75 12.93 87.91
NECEvent2014_7_1_scaffold_208 177_001_scaffold_208
Species: Lelliottia amnigena (60%)
15 23049 bp 58.63 20.07 94.30
NECEvent2014_7_1_scaffold_467 177_001_scaffold_467
Order: Enterobacteriales (86.67%)
15 12696 bp 47.44 20.96 69.59
NECEvent2014_7_1_scaffold_496 177_001_scaffold_496
Genus: Enterobacter (53.33%)
15 12054 bp 55.53 14.12 90.02
NECEvent2014_7_1_scaffold_509 177_001_scaffold_509
Genus: Enterobacter (93.33%)
15 11721 bp 56.25 17.69 94.37
NECEvent2014_7_1_scaffold_801 177_001_scaffold_801
Species: Escherichia coli (53.33%)
15 7906 bp 40.78 15.44 75.71
NECEvent2014_7_1_scaffold_550 177_001_scaffold_550
Genus: Enterobacter (80%)
15 11095 bp 56.17 15.02 92.83
NECEvent2014_7_1_scaffold_553 177_001_scaffold_553
Genus: Enterobacter (80%)
15 10965 bp 53.51 15.72 85.28
NECEvent2014_7_1_scaffold_324 177_001_scaffold_324
Genus: Enterobacter (80%)
15 19640 bp 56.35 15.14 93.99
NECEvent2014_7_1_scaffold_328 177_001_scaffold_328
Genus: Enterobacter (60%)
15 16669 bp 58.22 21.56 92.26
NECEvent2014_7_1_scaffold_338 177_001_scaffold_338
Species: Enterobacter sp. 35683 (57.14%)
14 16286 bp 60.01 21.24 92.64
NECEvent2014_7_1_scaffold_599 177_001_scaffold_599
Species: Enterobacter sp. 35683 (50%)
14 10320 bp 50.72 15.41 80.03
NECEvent2014_7_1_scaffold_345 177_001_scaffold_345
Species: Enterobacter sp. 35683 (57.14%)
14 16174 bp 55.87 15.20 89.55
NECEvent2014_7_1_scaffold_637 177_001_scaffold_637
Genus: Enterobacter (50%)
14 16115 bp 56.76 18.90 90.51
NECEvent2014_7_1_scaffold_385 177_001_scaffold_385
Genus: Enterobacter (71.43%)
14 14938 bp 54.44 19.28 92.23
NECEvent2014_7_1_scaffold_404 177_001_scaffold_404
Genus: Enterobacter (64.29%)
14 14363 bp 52.26 17.87 85.69
NECEvent2014_7_1_scaffold_494 177_001_scaffold_494
Genus: Enterobacter (57.14%)
14 12069 bp 54.53 16.74 85.65
NECEvent2014_7_1_scaffold_497 177_001_scaffold_497
Species: Lelliottia amnigena (64.29%)
14 12036 bp 53.67 13.47 85.77
Displaying items 51-100 of 658 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.