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NECEvent2014_7_1_Enterobacter_cloacae-rel_55_27_partial

NECEvent2014_7_1_Enterobacter_55_21
In projects: NECEvent2014_7_1

Consensus taxonomy: Enterobacter  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Many fragmented SCG.

Displaying items 51-100 of 658 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_7_1_scaffold_500 177_001_scaffold_500
Genus: Enterobacter (54.55%)
11 11965 bp 51.15 13.30 75.52
NECEvent2014_7_1_scaffold_2012 177_001_scaffold_2012
Species: Enterobacter sp. MGH 14 (66.67%)
3 2118 bp 51.18 17.49 75.64
NECEvent2014_7_1_scaffold_801 177_001_scaffold_801
Species: Escherichia coli (53.33%)
15 7906 bp 40.78 15.44 75.71
NECEvent2014_7_1_scaffold_2237 177_001_scaffold_2237
Species: Enterobacter sp. 35683 (100%)
1 1811 bp 57.15 17.23 75.87
NECEvent2014_7_1_scaffold_3404 177_001_scaffold_3404
Species: Lelliottia amnigena (100%)
1 1134 bp 56.26 14.68 76.19
NECEvent2014_7_1_scaffold_3367 177_001_scaffold_3367
Species: Enterobacter cloacae (100%)
1 1148 bp 52.35 16.86 76.57
NECEvent2014_7_1_scaffold_2287 177_001_scaffold_2287
Order: Enterobacteriales (66.67%)
3 1757 bp 56.40 15.79 77.01
NECEvent2014_7_1_scaffold_2453 177_001_scaffold_2453
Species: Enterobacter cloacae (100%)
1 1597 bp 44.02 165.31 77.02
NECEvent2014_7_1_scaffold_1970 177_001_scaffold_1970
Species: Enterobacter cloacae (50%)
2 2189 bp 54.64 10.14 77.02
NECEvent2014_7_1_scaffold_2391 177_001_scaffold_2391
Species: Lelliottia amnigena (50%)
2 1653 bp 52.57 14.70 77.68
NECEvent2014_7_1_scaffold_1925 177_001_scaffold_1925
Species: Enterobacter sp. 35683 (100%)
2 2279 bp 55.11 16.72 77.80
NECEvent2014_7_1_scaffold_1635 177_001_scaffold_1635
Species: Lelliottia amnigena (100%)
2 3080 bp 55.19 13.10 77.82
NECEvent2014_7_1_scaffold_2070 177_001_scaffold_2070
Species: Lelliottia amnigena (100%)
2 2023 bp 56.55 12.53 78.00
NECEvent2014_7_1_scaffold_1867 177_001_scaffold_1867
Species: Enterobacter sp. MGH 14 (50%)
2 2384 bp 52.77 16.55 78.02
NECEvent2014_7_1_scaffold_1056 177_001_scaffold_1056
Species: Enterobacter sp. 35683 (50%)
6 5718 bp 51.40 14.51 78.12
NECEvent2014_7_1_scaffold_2124 177_001_scaffold_2124
Species: Lelliottia amnigena (100%)
2 1960 bp 52.30 15.54 78.21
NECEvent2014_7_1_scaffold_714 177_001_scaffold_714
Species: Lelliottia amnigena (50%)
10 8898 bp 49.29 14.03 78.22
NECEvent2014_7_1_scaffold_531 177_001_scaffold_531
Species: Lelliottia amnigena (55.56%)
9 11487 bp 53.06 18.01 78.64
NECEvent2014_7_1_scaffold_1237 177_001_scaffold_1237
Species: Enterobacter sp. 35683 (75%)
4 4584 bp 52.29 12.76 78.73
NECEvent2014_7_1_scaffold_3129 177_001_scaffold_3129
Species: Enterobacter cloacae (100%)
1 1228 bp 57.57 17.22 78.91
NECEvent2014_7_1_scaffold_863 177_001_scaffold_863
Order: Enterobacteriales (80%)
10 7363 bp 50.06 16.99 78.95
NECEvent2014_7_1_scaffold_1625 177_001_scaffold_1625
Genus: Enterobacter (100%)
3 3099 bp 54.18 15.63 79.38
NECEvent2014_7_1_scaffold_1606 177_001_scaffold_1606
Species: Enterobacter sp. 35683 (75%)
4 3149 bp 53.76 17.29 79.45
NECEvent2014_7_1_scaffold_829 177_001_scaffold_829
Order: Enterobacteriales (100%)
7 7636 bp 55.36 14.99 79.48
NECEvent2014_7_1_scaffold_3009 177_001_scaffold_3009
Species: Cronobacter sakazakii (50%)
2 1268 bp 49.29 15.38 79.50
NECEvent2014_7_1_scaffold_1982 177_001_scaffold_1982
Species: Lelliottia amnigena (50%)
2 2172 bp 55.29 30.11 79.70
NECEvent2014_7_1_scaffold_932 177_001_scaffold_932
Genus: Enterobacter (66.67%)
9 6661 bp 55.79 15.56 79.90
NECEvent2014_7_1_scaffold_1155 177_001_scaffold_1155
Species: Enterobacter sp. 35683 (66.67%)
3 5106 bp 54.35 17.30 79.91
NECEvent2014_7_1_scaffold_599 177_001_scaffold_599
Species: Enterobacter sp. 35683 (50%)
14 10320 bp 50.72 15.41 80.03
NECEvent2014_7_1_scaffold_1409 177_001_scaffold_1409
Species: Enterobacter sp. 35683 (66.67%)
3 3872 bp 52.82 13.79 80.35
NECEvent2014_7_1_scaffold_1213 177_001_scaffold_1213
Genus: Enterobacter (57.14%)
7 4693 bp 53.04 16.20 80.44
NECEvent2014_7_1_scaffold_1698 177_001_scaffold_1698
Species: Enterobacter sp. 35669 (80%)
5 2863 bp 47.68 12.78 80.48
NECEvent2014_7_1_scaffold_521 177_001_scaffold_521
Species: Klebsiella pneumoniae (70%)
10 11586 bp 44.53 24.55 80.48
NECEvent2014_7_1_scaffold_1701 177_001_scaffold_1701
Genus: Enterobacter (60%)
5 2859 bp 46.52 16.05 80.48
NECEvent2014_7_1_scaffold_2891 177_001_scaffold_2891
Species: Lelliottia amnigena (100%)
1 1315 bp 50.04 14.26 80.53
NECEvent2014_7_1_scaffold_447 177_001_scaffold_447
Genus: Enterobacter (56.25%)
16 13165 bp 50.76 13.40 80.55
NECEvent2014_7_1_scaffold_1196 177_001_scaffold_1196
Order: Enterobacteriales (80%)
5 4790 bp 52.36 20.76 80.56
NECEvent2014_7_1_scaffold_1738 177_001_scaffold_1738
Species: Lelliottia amnigena (66.67%)
3 2717 bp 56.39 17.06 80.60
NECEvent2014_7_1_scaffold_2418 177_001_scaffold_2418
Species: Lelliottia amnigena (50%)
2 1626 bp 50.06 18.63 80.63
NECEvent2014_7_1_scaffold_1187 177_001_scaffold_1187
Genus: Enterobacter (60%)
5 4881 bp 51.69 23.29 80.70
NECEvent2014_7_1_scaffold_1790 177_001_scaffold_1790
Genus: Enterobacter (66.67%)
3 2576 bp 56.41 17.00 80.71
NECEvent2014_7_1_scaffold_1800 177_001_scaffold_1800
Species: Enterobacter cloacae (50%)
4 2540 bp 53.78 15.59 80.79
NECEvent2014_7_1_scaffold_679 177_001_scaffold_679
Genus: Enterobacter (63.64%)
11 9393 bp 50.73 21.32 80.80
NECEvent2014_7_1_scaffold_2995 177_001_scaffold_2995
Species: Enterobacter cloacae (50%)
2 1272 bp 55.42 19.22 80.90
NECEvent2014_7_1_scaffold_228 177_001_scaffold_228
Genus: Enterobacter (63.64%)
22 21831 bp 52.45 14.89 80.93
NECEvent2014_7_1_scaffold_1547 177_001_scaffold_1547
Genus: Enterobacter (50%)
4 3326 bp 51.68 21.33 81.00
NECEvent2014_7_1_scaffold_2069 177_001_scaffold_2069
Species: Enterobacter sp. 35683 (100%)
2 2023 bp 56.25 19.50 81.41
NECEvent2014_7_1_scaffold_1749 177_001_scaffold_1749
Species: Enterobacter sp. 35683 (60%)
5 2681 bp 52.85 15.89 81.46
NECEvent2014_7_1_scaffold_2292 177_001_scaffold_2292
Species: Salmonella enterica (66.67%)
3 1753 bp 37.99 10.10 81.63
NECEvent2014_7_1_scaffold_473 177_001_scaffold_473
Genus: Enterobacter (61.54%)
13 12564 bp 52.75 13.59 81.76
Displaying items 51-100 of 658 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.