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NECEvent2014_7_1_Enterobacter_cloacae-rel_55_27_partial

NECEvent2014_7_1_Enterobacter_55_21
In projects: NECEvent2014_7_1

Consensus taxonomy: Enterobacter  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Many fragmented SCG.

Displaying items 151-200 of 658 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_7_1_scaffold_119 177_001_scaffold_119
Species: Enterobacter cloacae (92.5%)
40 31662 bp 54.16 19.18 93.91
NECEvent2014_7_1_scaffold_2311 177_001_scaffold_2311
Species: Enterobacter hormaechei (100%)
1 1736 bp 51.96 19.18 97.98
NECEvent2014_7_1_scaffold_1468 177_001_scaffold_1468
Species: Lelliottia amnigena (50%)
4 3655 bp 57.46 19.17 86.59
NECEvent2014_7_1_scaffold_2185 177_001_scaffold_2185
Species: Pantoea ananatis (50%)
2 1875 bp 49.12 19.12 72.00
NECEvent2014_7_1_scaffold_3182 177_001_scaffold_3182
Species: Enterobacter sp. 35683 (100%)
1 1212 bp 56.11 19.06 90.35
NECEvent2014_7_1_scaffold_909 177_001_scaffold_909
Species: Enterobacter sp. 35683 (57.14%)
7 6879 bp 56.85 19.06 92.24
NECEvent2014_7_1_scaffold_520 177_001_scaffold_520
Genus: Enterobacter (55.56%)
9 11590 bp 56.16 19.05 93.00
NECEvent2014_7_1_scaffold_2321 177_001_scaffold_2321
Genus: Enterobacter (75%)
4 1726 bp 53.77 19.03 82.73
NECEvent2014_7_1_scaffold_730 177_001_scaffold_730
Genus: Enterobacter (66.67%)
9 8634 bp 61.42 19.01 95.52
NECEvent2014_7_1_scaffold_1960 177_001_scaffold_1960
Genus: Enterobacter (66.67%)
3 2204 bp 54.99 18.92 95.42
NECEvent2014_7_1_scaffold_637 177_001_scaffold_637
Genus: Enterobacter (50%)
14 16115 bp 56.76 18.90 90.51
NECEvent2014_7_1_scaffold_1360 177_001_scaffold_1360
Species: Enterobacter asburiae (60%)
5 4058 bp 58.26 18.89 91.01
NECEvent2014_7_1_scaffold_1679 177_001_scaffold_1679
Species: Enterobacter sp. 35683 (66.67%)
3 2930 bp 54.03 18.89 93.17
NECEvent2014_7_1_scaffold_2032 177_001_scaffold_2032
Genus: Enterobacter (66.67%)
3 2081 bp 56.17 18.89 97.60
NECEvent2014_7_1_scaffold_1855 177_001_scaffold_1855
Species: Enterobacter sp. 35683 (50%)
4 2422 bp 59.37 18.89 92.90
NECEvent2014_7_1_scaffold_2792 177_001_scaffold_2792
Species: Enterobacter sp. 35683 (100%)
2 1376 bp 58.58 18.86 84.59
NECEvent2014_7_1_scaffold_1265 177_001_scaffold_1265
Genus: Enterobacter (66.67%)
3 4496 bp 56.29 18.85 97.22
NECEvent2014_7_1_scaffold_2293 177_001_scaffold_2293
Order: Enterobacteriales (100%)
3 1750 bp 53.60 18.77 89.31
NECEvent2014_7_1_scaffold_1866 177_001_scaffold_1866
Species: Lelliottia amnigena (100%)
1 2384 bp 62.12 18.69 99.92
NECEvent2014_7_1_scaffold_1224 177_001_scaffold_1224
Genus: Enterobacter (50%)
4 4622 bp 58.24 18.69 98.92
NECEvent2014_7_1_scaffold_1300 177_001_scaffold_1300
Species: Enterobacter sp. 35683 (50%)
4 4339 bp 55.47 18.67 94.10
NECEvent2014_7_1_scaffold_2418 177_001_scaffold_2418
Species: Lelliottia amnigena (50%)
2 1626 bp 50.06 18.63 80.63
NECEvent2014_7_1_scaffold_2044 177_001_scaffold_2044
Species: Enterobacter cloacae (50%)
2 2059 bp 55.51 18.58 88.00
NECEvent2014_7_1_scaffold_1314 177_001_scaffold_1314
Genus: Enterobacter (80%)
5 4256 bp 56.51 18.50 90.37
NECEvent2014_7_1_scaffold_1413 177_001_scaffold_1413
Species: Enterobacter sp. 35683 (75%)
4 3863 bp 55.09 18.44 82.94
NECEvent2014_7_1_scaffold_859 177_001_scaffold_859
Species: Lelliottia amnigena (57.14%)
7 7383 bp 55.44 18.41 93.42
NECEvent2014_7_1_scaffold_889 177_001_scaffold_889
Genus: Enterobacter (71.43%)
7 7113 bp 57.50 18.41 91.82
NECEvent2014_7_1_scaffold_1171 177_001_scaffold_1171
Order: Enterobacteriales (100%)
8 4990 bp 48.98 18.40 67.27
NECEvent2014_7_1_scaffold_2178 177_001_scaffold_2178
Species: Enterobacter sp. 35683 (100%)
2 1884 bp 53.98 18.31 90.13
NECEvent2014_7_1_scaffold_2379 177_001_scaffold_2379
Species: Lelliottia amnigena (100%)
1 1665 bp 53.33 18.29 99.82
NECEvent2014_7_1_scaffold_539 177_001_scaffold_539
Genus: Enterobacter (69.23%)
13 11363 bp 55.00 18.28 92.25
NECEvent2014_7_1_scaffold_837 177_001_scaffold_837
Genus: Enterobacter (100%)
6 7593 bp 61.79 18.25 90.00
NECEvent2014_7_1_scaffold_1330 177_001_scaffold_1330
Genus: Enterobacter (80%)
5 4210 bp 55.91 18.24 98.05
NECEvent2014_7_1_scaffold_200 177_001_scaffold_200
Species: Lelliottia amnigena (56%)
25 23957 bp 56.61 18.23 90.42
NECEvent2014_7_1_scaffold_2355 177_001_scaffold_2355
Species: Escherichia coli (100%)
1 1692 bp 45.21 18.09 100.00
NECEvent2014_7_1_scaffold_1682 177_001_scaffold_1682
Species: Lelliottia amnigena (50%)
4 2920 bp 57.40 18.08 90.51
NECEvent2014_7_1_scaffold_1511 177_001_scaffold_1511
Species: Lelliottia amnigena (75%)
4 3468 bp 56.57 18.08 93.34
NECEvent2014_7_1_scaffold_3772 177_001_scaffold_3772
Species: Enterobacter sp. 35669 (100%)
1 1033 bp 47.14 18.01 95.26
NECEvent2014_7_1_scaffold_531 177_001_scaffold_531
Species: Lelliottia amnigena (55.56%)
9 11487 bp 53.06 18.01 78.64
NECEvent2014_7_1_scaffold_1725 177_001_scaffold_1725
Species: Lelliottia amnigena (50%)
6 2775 bp 53.12 18.00 93.73
NECEvent2014_7_1_scaffold_1814 177_001_scaffold_1814
Genus: Enterobacter (50%)
4 2517 bp 45.49 18.00 66.79
NECEvent2014_7_1_scaffold_1918 177_001_scaffold_1918
Species: Lelliottia amnigena (100%)
2 2285 bp 56.28 17.99 95.45
NECEvent2014_7_1_scaffold_1345 177_001_scaffold_1345
Species: Enterobacter cloacae (75%)
4 4118 bp 57.09 17.99 97.11
NECEvent2014_7_1_scaffold_1380 177_001_scaffold_1380
Species: Enterobacter sp. 35683 (66.67%)
3 3981 bp 57.17 17.97 96.68
NECEvent2014_7_1_scaffold_307 177_001_scaffold_307
Genus: Enterobacter (81.25%)
16 17302 bp 56.78 17.91 91.69
NECEvent2014_7_1_scaffold_1234 177_001_scaffold_1234
Genus: Enterobacter (60%)
5 4591 bp 54.72 17.90 82.66
NECEvent2014_7_1_scaffold_2096 177_001_scaffold_2096
Order: Enterobacteriales (66.67%)
3 1988 bp 56.44 17.88 86.62
NECEvent2014_7_1_scaffold_404 177_001_scaffold_404
Genus: Enterobacter (64.29%)
14 14363 bp 52.26 17.87 85.69
NECEvent2014_7_1_scaffold_723 177_001_scaffold_723
Species: Lelliottia amnigena (50%)
10 8773 bp 55.18 17.87 94.14
NECEvent2014_7_1_scaffold_2279 177_001_scaffold_2279
Species: Lelliottia amnigena (66.67%)
3 1764 bp 48.02 17.86 89.97
Displaying items 151-200 of 658 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.