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NECEvent2014_7_1_scaffold_201

Alias: 177_001_scaffold_201

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_201_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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38..493
DNA (456bp) protein (152aa)
RNA polymerase-binding transcription factor DksA n=1448 Tax=Enterobacteriaceae RepID=DKSA_ECO57 rbh
dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric
NECEvent2014_7_1_scaffold_201_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

530..1456
DNA (927bp) protein (309aa)
glutamyl-Q tRNA(Asp) synthetase (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
Glutamyl-Q tRNA(Asp) synthetase n=53 Tax=Escherichia coli RepID=B1IQJ6_ECOLC rbh
NECEvent2014_7_1_scaffold_201_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1549..2913
DNA (1365bp) protein (455aa)
pcnB; poly(A) polymerase I (EC:2.7.7.19)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=469008 species="Bacteria; Proteobacteria;
Poly(A) polymerase I n=66 Tax=Escherichia coli RepID=C6UMA4_ECOBR rbh
NECEvent2014_7_1_scaffold_201_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2910..3365
DNA (456bp) protein (152aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=30 Tax=Escherichia coli RepID=B1IQJ8_ECOLC
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EOW29086.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
NECEvent2014_7_1_scaffold_201_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3551..4135
DNA (585bp) protein (195aa)
Uncharacterized fimbrial-like protein YadN n=502 Tax=Enterobacteriaceae RepID=YADN_ECOLI rbh
yadN; fimbrial-like protein
Fimbrial family protein {ECO:0000313|EMBL:EGW99010.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_1_scaffold_201_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4240..4980
DNA (741bp) protein (247aa)
Chaperone protein EcpD n=35 Tax=Escherichia coli RepID=B2NC86_ECOLX rbh
Chaperone protein EcpD {ECO:0000313|EMBL:EKJ83370.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
ecpD; putative chaperone protein EcpD
NECEvent2014_7_1_scaffold_201_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5015..7612
DNA (2598bp) protein (866aa)
Outer membrane usher protein htrE n=2 Tax=Escherichia coli RepID=L2VD46_ECOLX rbh
Outer membrane usher protein htrE {ECO:0000313|EMBL:ESK00809.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
htrE; predicted outer membrane usher protein
NECEvent2014_7_1_scaffold_201_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7629..8198
DNA (570bp) protein (190aa)
Uncharacterized protein YadM n=74 Tax=Escherichia RepID=YADM_ECOLI rbh
yadM; fimbrial-like adhesin protein
Fimbrial-like adhesin protein {ECO:0000313|EMBL:ELC12451.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_7_1_scaffold_201_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8210..8815
DNA (606bp) protein (202aa)
Uncharacterized protein YadL n=119 Tax=Escherichia RepID=YADL_ECOLI rbh
yadL; putative fimbrial-like adhesin protein
Predicted fimbrial-like adhesin protein {ECO:0000313|EMBL:CBI99634.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_7_1_scaffold_201_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8842..9438
DNA (597bp) protein (199aa)
Uncharacterized protein n=17 Tax=Escherichia coli RepID=K5C392_ECOLX rbh
putative fimbrial protein
Uncharacterized protein {ECO:0000313|EMBL:ENB16525.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_201_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9488..10726
DNA (1239bp) protein (413aa)
Uncharacterized fimbrial-like protein YadC n=117 Tax=Escherichia RepID=YADC_ECOLI rbh
yadC; fimbrial-like adhesin protein
Fimbrial family protein {ECO:0000313|EMBL:KEO29781.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_201_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10840..11037
DNA (198bp) protein (66aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Escherichia coli N1 RepID=K3KZZ2_ECOLX
NECEvent2014_7_1_scaffold_201_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10986..11471
DNA (486bp) protein (162aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Escherichia coli RepID=N3MCG5_ECOLX
NECEvent2014_7_1_scaffold_201_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11483..12334
DNA (852bp) protein (284aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
Pantothenate synthetase n=430 Tax=Enterobacteriaceae RepID=PANC_ECO24 rbh
NECEvent2014_7_1_scaffold_201_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12408..13310)
DNA (903bp) protein (301aa)
Uncharacterized protein YadD n=127 Tax=Escherichia RepID=YADD_ECOLI rbh
yadD; putative transposase
Uncharacterized protein {ECO:0000313|EMBL:KDX89705.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_201_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13584..13964
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=1325 Tax=Enterobacteriaceae RepID=PAND_ECO24
panD; aspartate 1-decarboxylase
NECEvent2014_7_1_scaffold_201_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13968..15197)
DNA (1230bp) protein (410aa)
Uncharacterized protein YadE n=127 Tax=Escherichia RepID=YADE_ECOLI rbh
yadE; putative polysaccharide deacetylase lipoprotein
Putative polysaccharide deacetylase lipoprotein {ECO:0000313|EMBL:AFG39010.1}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_7_1_scaffold_201_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15261..15701)
DNA (441bp) protein (147aa)
AgaX n=48 Tax=Escherichia coli RepID=C6EAS8_ECOBD rbh
yadI; PTS Enzyme IIA rbh
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EMX23665.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
NECEvent2014_7_1_scaffold_201_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15806..16576)
DNA (771bp) protein (257aa)
Inner membrane transport permease YadH n=1360 Tax=Enterobacteriaceae RepID=YADH_ECO57 rbh
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_7_1_scaffold_201_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16573..17499)
DNA (927bp) protein (309aa)
Uncharacterized ABC transporter ATP-binding protein YadG n=718 Tax=Enterobacteriaceae RepID=YADG_ECOLI rbh
yadG; transporter subunit: ATP-binding component of ABC superfamily
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAG75651.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_1_scaffold_201_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17608..18270
DNA (663bp) protein (221aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
Carbonic anhydrase 2 n=884 Tax=Enterobacteriaceae RepID=CAN_ECOLI rbh
can; carbonic anhydrase
NECEvent2014_7_1_scaffold_201_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18311..18847)
DNA (537bp) protein (179aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EHU29999.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EHU29999.1};; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Hypoxanthine phosphoribosyltransferase n=1019 Tax=Enterobacteriaceae RepID=HPRT_ECOL6 rbh
hpt; hypoxanthine phosphoribosyltransferase
NECEvent2014_7_1_scaffold_201_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19053..21443
DNA (2391bp) protein (797aa)
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family n=1 Tax=Escherichia coli AD30 RepID=K5BVH8_ECOLX rbh
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family {ECO:0000313|EMBL:EKJ83389.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent
glucose dehydrogenase
NECEvent2014_7_1_scaffold_201_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21645..23195)
DNA (1551bp) protein (517aa)
Blue copper oxidase CueO n=138 Tax=Bacteria RepID=CUEO_ECOLI rbh
Blue copper oxidase CueO {ECO:0000313|EMBL:KDY91881.1}; TaxID=1444127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
multicopper oxidase type 3
NECEvent2014_7_1_scaffold_201_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23361..23708
DNA (348bp) protein (116aa)
YacC protein n=14 Tax=Escherichia coli RepID=D6I515_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE32108.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_201_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23814..24680
DNA (867bp) protein (289aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=447 Tax=Enterobacteriaceae RepID=SPEE_ECO24 rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=79
NECEvent2014_7_1_scaffold_201_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24696..25490
DNA (795bp) protein (265aa)
S-adenosylmethionine decarboxylase proenzyme n=993 Tax=Enterobacteriaceae RepID=SPED_ECO24 rbh
speD; S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF
NECEvent2014_7_1_scaffold_201_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25528..25890)
DNA (363bp) protein (121aa)
UPF0231 protein YacL n=1154 Tax=Enterobacteriaceae RepID=YACL_ECO24
hypothetical protein
UPF0231 protein YacL {ECO:0000256|HAMAP-Rule:MF_01053}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_1_scaffold_201_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26066..28663)
DNA (2598bp) protein (866aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRN
Aconitate hydratase 2 n=222 Tax=Enterobacteriaceae RepID=ACON2_ECOLI rbh
acnB; aconitate hydratase AcnB
NECEvent2014_7_1_scaffold_201_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29018..30871
DNA (1854bp) protein (618aa)
Uncharacterized protein n=14 Tax=Escherichia coli RepID=B3XKK3_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:EQY69950.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein rbh
Displaying items 1-30 of 32 in total

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