ggKbase home page

NECEvent2014_7_1_scaffold_32_26

Organism: NECEvent2014_7_1_Escherichia_coli_51_198_partial

partial RP 25 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(26293..26964)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized HTH-type transcriptional regulator YbiH n=872 Tax=Bacteria RepID=YBIH_ECOLI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 445
  • Evalue 2.60e-122
  • rbh
putative DNA-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 445
  • Evalue 7.20e-123
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ESA62052.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 445
  • Evalue 3.60e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGAATAATCCTGCCATGACAATCAAGGGTGAACAGGCGAAAAAACAGCTGATTGCTGCCGCACTGGCGCAGTTTGGTGAATATGGAATGAACGCCACCACTCGCGAGATAGCCGCCCAGGCCGGGCAGAATATCGCTGCCATCACCTACTACTTCGGTTCGAAAGAAGATTTGTACCTCGCCTGCGCCCAGTGGATTGCCGATTTTATTGGCGAGCAGTTCCGTCCGCATGCCGAGGAAGCCGAACGCTTGTTCGCGCAACCACAGCCTGATCGGGCTGCCATCCGTGAACTGATCCTTCGCGCCTGCAGGAACATGATTAAGCTGCTCACCCAGGATGACACCGTCAACCTCAGCAAGTTTATCTCCCGTGAGCAGCTCTCTCCCACGGCAGCCTACCACCTGGTGCACGAACAGGTGATTAGTCCGCTACACAGCCACCTGACACGCCTGATTGCCGCCTGGACCGGCTGCGACGCCAATGACACCCGCATGATCCTTCATACCCATGCGTTGATTGGTGAGATTCTGGCGTTCCGTCTTGGCAAAGAAACAATTCTGTTACGTACCGGCTGGACCGCGTTCGATGAAGAAAAGACCGAACTGATCAACCAGACGGTGACCTGTCATATCGACCTGATTTTGCAAGGATTATCGCAAAGGAGTTTGTAG
PROTEIN sequence
Length: 224
MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL*