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NECEvent2014_7_1_scaffold_70_10

Organism: NECEvent2014_7_1_Escherichia_coli_51_198_partial

partial RP 25 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 9700..10173

Top 3 Functional Annotations

Value Algorithm Source
PTS system, N-acetylgalactosamine-specific, IIB component n=754 Tax=Enterobacteriaceae RepID=A8A4U7_ECOHS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 313
  • Evalue 1.40e-82
  • rbh
agaV; acetylgalactosamine-specific PTS system enzyme IIB component similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 313
  • Evalue 3.90e-83
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:EIQ26206.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigel similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 313
  • Evalue 2.00e-82

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Taxonomy

Shigella boydii → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGTCGGCGTTCAATGGGTCGGATTTGCGGGGGCAAATCTGGTGCTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTCATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAGCCGCTGGGGTGGAATGCTTCGTTCAGGGCGTCCCGACAGAGCCTGCTGTGGACCTCTTTAAATTACTTTGA
PROTEIN sequence
Length: 158
MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL*