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NECEvent2014_7_1_scaffold_1355_1

Organism: NECEvent2014_7_1_Escherichia_coli_51_198_partial

partial RP 25 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(245..913)

Top 3 Functional Annotations

Value Algorithm Source
UPF0758 protein yicR n=27 Tax=Escherichia coli RepID=B2N6H2_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 436
  • Evalue 1.20e-119
  • rbh
UPF0758 protein YicR {ECO:0000256|HAMAP-Rule:MF_00018}; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 436
  • Evalue 2.20e-119
radC; DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 222.0
  • Bit_score: 434
  • Evalue 1.70e-119

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GTGAAAAATAATGCACAGCTGTTGATGCCGCGCGAAAAAATGCTGAAGTTTGGTATTAGCGCCTTAACGGATGTCGAGCTGCTGGCGCTATTTCTGCGTACCGGAACGCGCGGTAAAGATGTATTAACCCTGGCAAAAGAGATGCTGGAGAATTTCGGCTCTCTTTATGGCTTGTTAACCTCTGAATATGAACAATTTAGTGGTGTTCATGGAATTGGCGTAGCGAAATTTGCCCAGTTAAAGGGGATTGCTGAACTGGCGCGGCGTTACTACAACGTGCGGATGCGTGCAGAAAGCCCTTTACTCAGCCCGGAGATGACGCGGGAATTTTTACAAAGCCAGCTCACGGGTGAGGAGCGGGAGATCTTTATGGTGATCTTTCTCGACTCACAACACCGGGTTATAACGCATAGCCGTCTTTTTTCCGGCACGCTAAACCATGTTGAAGTCCATCCTCGGGAAATTATCCGCGAAGCGATAAAAATAAACGCCTCGGCGCTGATCCTTGCACATAATCACCCTTCGGGTTGTGCTGAACCCAGTAAAGCGGATAAACTCATTACTGAACGGATAATAAAGAGTTGTCAGTTCATGGATTTACGCGTGCTCGACCATATCGTGATTGGGCGTGGAGAGTATGTTTCTTTTGCCGAACGCGGCTGGATTTAA
PROTEIN sequence
Length: 223
VKNNAQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMRAESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI*