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NECEvent2014_7_2_scaffold_11_122

Organism: NECEvent2014_7_2_Cronobacter_sakazakii_56_411_partial

partial RP 25 / 55 MC: 4 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 118875..119420

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Citrobacter sp. 30_2 RepID=C1M6W3_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 181.0
  • Bit_score: 356
  • Evalue 1.30e-95
  • rbh
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 181.0
  • Bit_score: 356
  • Evalue 4.70e-96
RNA polymerase sigma 70 {ECO:0000313|EMBL:AGQ61032.1}; TaxID=1173427 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella ent similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 181.0
  • Bit_score: 356
  • Evalue 2.30e-95

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Taxonomy

Salmonella enterica → Salmonella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAGTGATGTAACGGCATTCAACAACTGCATGAGCGCGTTATGGCGGCAACATGAAGCCGAACTCTCTCGCTTCCTGACATCGAAGACAGGTGATAGCGAAAAAGCAGTAGACCTTCTGCAAGAGCTATTCCTGCGTGCCCGCGCTCATTCAGACAGTTTCTGCGAGATGGAGAATCCGCGAGCCTGGCTATATCGGGCGGCGAGGAATCTGCTGATTGATGAGTACCGCACCACCAGGGAGTTTGTTGAGCTGGAAGAAGATGCCCCATTAACAGACGCATCCCCTGATGCAATCTCAACGCTGGATATTTGCCTGCCTGAAACATTACAGGCTTTACCCGAAGATGAGCGATGGTTGATTGAAGAGTCCGACCTTAACCGGCGTCCCCAGCAGTCTCTGGCCGATGAACTGCGAATCACGCTTACGGCGTTTAAATCCCGTTTGCTTCGGGCCAGAAAGCACCTGAAAGAAACGATGACAGAACTTTGTCAGATTGAGGCGGATGACACGACTCCCATCTGCTGCCACAAAAAAATGAATTAA
PROTEIN sequence
Length: 182
MSDVTAFNNCMSALWRQHEAELSRFLTSKTGDSEKAVDLLQELFLRARAHSDSFCEMENPRAWLYRAARNLLIDEYRTTREFVELEEDAPLTDASPDAISTLDICLPETLQALPEDERWLIEESDLNRRPQQSLADELRITLTAFKSRLLRARKHLKETMTELCQIEADDTTPICCHKKMN*