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NECEvent2014_7_2_scaffold_354_3

Organism: NECEvent2014_7_2_Cronobacter_sakazakii_56_411_partial

partial RP 25 / 55 MC: 4 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(2802..3449)

Top 3 Functional Annotations

Value Algorithm Source
Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family n=2 Tax=Cronobacter sakazakii RepID=K8CJ64_CROSK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 435
  • Evalue 2.60e-119
  • rbh
CFSAN001453_contig0055, whole genome shotgun sequence {ECO:0000313|EMBL:KIU59426.1}; TaxID=1128983 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronob similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 435
  • Evalue 3.60e-119
DNA-binding transcriptional regulator EnvR similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 215.0
  • Bit_score: 434
  • Evalue 2.10e-119
  • rbh

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Taxonomy

Cronobacter malonaticus → Cronobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGGCCCGGAGAACCAAACAAGAGGCGCTTAAAACGCGCCAGCAGCTTATTGAAGCCGCTATCTTTACATTTGCCGAGCGCGGTGTCGCGCACACGACGCTTACGGATATCGCGCAGGCCGCACAGGTGACACGCGGCGCGGTGTACTGGCATTTCACCAGTAAGGCCGAATTGTTTAATGAAATCTGGCAACAGCAATTACCGGTAAGAGACATTATTCGCCCGAACATTCCGGAAGACGCATGGCGCGATCCTTTACGCTTATTACGTGAAACCTTTATTGCTGCGCTGCAATATATCGCCCGTAGCCCACGCCAGCGTGCGCTGCTGCAAATTCTTTACCGCAAATGCGAATTTGATGAAGAGATGATGCCGGAGAGTGAAATCCGTGAGCGTATTGGTTTCAGTCGTTGTTATATCGGGGAATTACTGCGTAAGGGGATTGCGGAGAAACAGATAGCGGGATCTCTGGATGTCGATATTATGTTAACGATTTTACACGGTTGCCTGAGCGGTATTCTTAAAAACTGGTTATTTGAGCCAGAGGCGTGCGATCTTTTCAGACAAGCCCCCGTGCTGGTGGACAATATTTTGCGGATGTTGCCGCGCCCGGAAAATAATAATCCGCAGCCGGGCAATGAACATTAA
PROTEIN sequence
Length: 216
MARRTKQEALKTRQQLIEAAIFTFAERGVAHTTLTDIAQAAQVTRGAVYWHFTSKAELFNEIWQQQLPVRDIIRPNIPEDAWRDPLRLLRETFIAALQYIARSPRQRALLQILYRKCEFDEEMMPESEIRERIGFSRCYIGELLRKGIAEKQIAGSLDVDIMLTILHGCLSGILKNWLFEPEACDLFRQAPVLVDNILRMLPRPENNNPQPGNEH*