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NECEvent2014_7_2_scaffold_2160_1

Organism: NECEvent2014_7_2_Enterobacter_cloacae-rel_55_179_partial

partial RP 23 / 55 MC: 2 BSCG 18 / 51 ASCG 11 / 38 MC: 1
Location: 29..1552

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 462.0
  • Bit_score: 911
  • Evalue 1.10e-262
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 462.0
  • Bit_score: 911
  • Evalue 5.20e-262
DNA-directed RNA polymerase subunit beta n=13 Tax=Cronobacter RepID=RPOB_CROS8 similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 462.0
  • Bit_score: 911
  • Evalue 3.70e-262

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Taxonomy

Cronobacter sakazakii → Cronobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
ATGGTTTACTCCTATACCGAGAAAAAACGTATTCGTAAGGATTTTGGTAAACGTCCACAAGTTCTGGATGTTCCCTATCTCCTTTCTATCCAGCTTGACTCGTTCCAGAAATTTATCGAGCAAGATCCTGAGGGGCAGTACGGCCTGGAAGCAGCTTTCCGCTCCGTATTCCCGATCCAGAGCTACAGCGGCAATTCGGAACTGCAATACGTCAGCTACCGTCTTGGCGAACCTGTTTTTGATGTTAAAGAATGCCAAATCCGTGGCGTGACCTATTCGGCACCGCTGCGCGTTAAGCTGCGTCTGGTGATCTACGAGCGCGAAGCGCCGGAAGGCACCGTTAAAGACATCAAAGAGCAAGAAGTTTACATGGGCGAAATCCCGCTCATGACCGATAACGGTACCTTTGTCATTAACGGTACTGAGCGTGTTATCGTTTCTCAGCTGCACCGTAGCCCGGGCGTGTTCTTTGACAGCGACAAGGGCAAAACCCACTCCTCTGGTAAGGTGCTGTATAACGCACGCATCATTCCTTACCGTGGCTCCTGGCTGGACTTCGAATTCGATCCAAAAGACAACCTGTTTGTCCGTATCGACCGTCGTCGTAAGCTGCCGGCAACTATCATCCTGCGCGCGCTGGATTACACCACTGAGCAGATCCTTGACCTGTTCTTCGAGAAAGTGGTTTTCGAAATCCGCGACAACAAGCTGCAGATGGAGTTGATTCCGGAGCGTCTGCGTGGTGAAACCGCGTCCTTTGATATCGAAGCAAACGGCAAAATTTACGTAGAAAAAGGCCGTCGTATCACTGCGCGTCATATCCGCCAGCTCGAAAAAGACGAAATCAAACACATCGAAGTTCCGGTTGAATACATCGCCGGTAAAGTCGCTGCGAAAGATTATGTGGATGCTTCCACTGGCGAGCTGATTTGTCCGGCCAACATGGAACTGTCTCTGGATCTGCTGGCGAAACTGAGCCAGTCTGGCCACAAACGTATCGAGACGCTGTTCACCAACGACCTCGACCACGGCCCATATATTTCTGAGACCGTTCGCGTCGACCCGACCACCGATCGCCTGAGCGCGCTGGTTGAGATCTACCGCATGATGCGTCCTGGCGAGCCGCCGACGCGTGAAGCGGCCGAAAGCCTGTTTGAGAACCTGTTCTTCTCTGAAGATCGTTACGATCTGTCTGCGGTAGGCCGCATGAAGTTCAACCGTTCTCTGCTGCGCGACGAGATCGAAGGTTCCGGTATCCTGAGCAAAGCTGACATCATCGACGTGATGAAGAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTGGACGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCGGAAAGAGCGTCTGTCTCTGGGCGATCTGGATACCCTGATGCCTCAGGATATGATCAACGCCAAGCCGATTTCTGCAGCAGTGAAAGAGTTCTTCGGTTCCAGCCAGCTGTCTCAGTTCATGGACCAGAACAACCCGCTGTCTGA
PROTEIN sequence
Length: 508
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALDYTTEQILDLFFEKVVFEIRDNKLQMELIPERLRGETASFDIEANGKIYVEKGRRITARHIRQLEKDEIKHIEVPVEYIAGKVAAKDYVDASTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTTDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGILSKADIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAERASVSGRSGYPDASGYDQRQADFCSSERVLRFQPAVSVHGPEQPAV*