ggKbase home page

NECEvent2014_7_2_scaffold_3045_1

Organism: NECEvent2014_7_2_Bifidobacterium_breve_58_6

partial RP 40 / 55 MC: 6 BSCG 33 / 51 ASCG 7 / 38 MC: 2
Location: comp(59..1021)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobact similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 628
  • Evalue 7.30e-177
Pseudouridine synthase, RluA family n=5 Tax=Bifidobacterium breve RepID=F6C8A0_BIFBA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 628
  • Evalue 5.20e-177
  • rbh
Ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 628
  • Evalue 1.50e-177

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium breve → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 963
GGAGGCAGATGCCGAATAATGAGCCGAATGGTCCCCGCCCCTGATGCACTGATTGGCAAGCGTTTCGATGTGGCAGTCGCGAAGATGCTCGGCATATCGCGTTCCAAGGCCGCCGATCTGATCGACTCCGGTCAGGCTCGCGTTCTTGGACGCGAGGTCGCACGCTCCAGTTCCTTAATGGCAGGGGAGACCGTCGAATTCGATTTGGTTGAGAATCATGTCGAACCGGAACCCATCGCGAACGATATGGCCGTGGTCTATGAGGACGATGATGTCGTCGTAGTTGATAAGCCGGTGGGAGTAGCGGCCCATGCTTCAGTCGGATGGTCCGGGCCTACGGTTCTCGGATCGTTGCGCGACCGCGGAGTGCGCATTACTTCCTATGGTGCTGCAGGACGTGAGGGCATAGTCTCGCGGCTTGACGTGGGGACTTCCGGCCTTATGCTGGTATGCAAATCCGAGTTGGCGTACACGGAAATGCGTCGGCAATTCGCGGAGCATGAAGTGAAGAAAACCTATCATGCCCTGGTGCAGGGTGGGTTGAAAGAGGACAAAGCCACCATCGAGGCTCCGATTGGGCGAGCAAAAGTCTCTGATTTTCGATTCTGCATCACTCCAGCAGGAAAGCCGGCCATCACTCATTGGGATGTACTGGAGCGGTTCGACCACGAGGCCACATTGGTATCCGTGAATCTGGAGACCGGTCGTACCCATCAGATTCGTGTGCATTTCTCTTCCATTGGTCACCCGTTATGCGGAGACCCCATGTATGGTGCCAATCCGGTGCTGTCCGAGGCTCTGGGTCTTGACCGCCAATGGTTGCACGCTATGAAGCTTGAATTCCGCCATCCCCGCACGCGCGTCTGGACTACGGTCGAGTCTCATTACCCTGCTGACTTAGCTGCTGCTCTTGATGTCATGCGCGCTCGTCATACCGAGCCGGTTGAATCGTTGGTGGATTAG
PROTEIN sequence
Length: 321
GGRCRIMSRMVPAPDALIGKRFDVAVAKMLGISRSKAADLIDSGQARVLGREVARSSSLMAGETVEFDLVENHVEPEPIANDMAVVYEDDDVVVVDKPVGVAAHASVGWSGPTVLGSLRDRGVRITSYGAAGREGIVSRLDVGTSGLMLVCKSELAYTEMRRQFAEHEVKKTYHALVQGGLKEDKATIEAPIGRAKVSDFRFCITPAGKPAITHWDVLERFDHEATLVSVNLETGRTHQIRVHFSSIGHPLCGDPMYGANPVLSEALGLDRQWLHAMKLEFRHPRTRVWTTVESHYPADLAAALDVMRARHTEPVESLVD*