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NECEvent2014_7_2_scaffold_125_18

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 12800..13087

Top 3 Functional Annotations

Value Algorithm Source
Ribosome hibernation promoting factor n=1406 Tax=Enterobacteriaceae RepID=HPF_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 190
  • Evalue 8.30e-46
raiA; putative sigma(54) modulation protein (ORF95) RaiA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 190
  • Evalue 2.30e-46
Ribosomal subunit interface protein {ECO:0000313|EMBL:ESE08280.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 190
  • Evalue 1.20e-45

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGCAGCTCAACATTACCGGAAATAACGTCGAGATCACCGAGGCACTGCGCGAATTTGTTACAGCCAAATTTGCCAAACTTGAGCAATATTTTGACCGAATCAACCAGGTCTATGTTGTTCTGAAAGTGGAGAAAGTCACCCACACCTCAGATGCAACACTGCATGTAAACGGTGGTGAAATTCATGCCAGCGCGGAAGGTCAGGACATGTACGCTGCCATTGATGGCTTAATTGATAAGCTGGCACGCCAGTTGACCAAACATAAAGATAAACTGAAACAACACTAA
PROTEIN sequence
Length: 96
MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVEKVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH*