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NECEvent2014_7_2_scaffold_397_6

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 3665..4141

Top 3 Functional Annotations

Value Algorithm Source
Regulator of sigma D n=964 Tax=Enterobacteriaceae RepID=RSD_ECO24 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 318
  • Evalue 4.40e-84
  • rbh
regulator of RpoD, Rsd/AlgQ similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 318
  • Evalue 1.20e-84
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 318
  • Evalue 6.10e-84

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCTTAACCAGCTCGATAACCTGACGGAGCGCGTCAGAGGAAGTAACAAACTGGTTGATCGCTGGCTACATGTACGTAAGCATCTGCTCGTGGCTTACTACAATCTGGTTGGCATTAAGCCTGGCAAAGAATCGTACATGAGGCTAAACGAAAAAGCCCTTGATGATTTTTGTCAGAGCCTGGTCGATTACTTGTCTGCCGGACATTTCAGTATTTATGAGCGCATTCTTCATAAGCTGGAAGGCAACGGGCAACTCGCGCGCGCCGCGAAGATTTGGCCGCAACTCGAAGCCAATACCCAACAGATTATGGATTACTACGATTCCAGCCTGGAAACCGCCATCGATCATGATAATTACCTTGAGTTTCAACAGGTTTTATCTGACATCGGCGAGGCGCTGGAAGCGCGCTTTGTGCTGGAAGATAAGCTGATTCTGCTGGTGCTTGACGCCGCCCGCGTCAAACATCCTGCTTGA
PROTEIN sequence
Length: 159
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA*