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NECEvent2014_7_2_scaffold_415_7

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(6768..8015)

Top 3 Functional Annotations

Value Algorithm Source
Miniconductance mechanosensitive channel YbdG n=373 Tax=Enterobacteriaceae RepID=YBDG_ECOLI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 415.0
  • Bit_score: 814
  • Evalue 3.90e-233
  • rbh
ybdG; mechanosensitive ion channel family protein YbdG similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 415.0
  • Bit_score: 814
  • Evalue 1.10e-233
  • rbh
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EGI99294.1}; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 415.0
  • Bit_score: 814
  • Evalue 5.50e-233

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Taxonomy

Shigella boydii → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGCAGGATTTAATATCCCAGGTTGAAGATTTAGCGGGTATTGAGATCGATCACACCACCTCGATGGTGATGATTTTCGGTATTATTTTTCTGACCGCCGTCGTGGTGCATATTATTTTGCATTGGGTGGTACTGCGGACCTTCGAAAAACGTGCCATCGCCAGTTCACGGCTTTGGTTGCAAATCATTACCCAGAATAAACTCTTCCACCGTTTAGCTTTTACCCTGCAGGGGATTATCGTCAATATTCAGGCGGTATTCTGGCTGCAAAAAGGCACCGAAGCGGCAGATATTCTGACTACCTGCGCGCAGTTGTGGATCATGATGTATGCGCTGCTTTCAGTCTTCTCGTTGCTGGATGTTATTTTGAATCTGGCGCAGAAATTCCCGGCAGCATCTCAGTTACCGCTGAAAGGGATATTTCAGGGGATTAAACTGATCGGCGCGATTCTGGTCGGCATTTTGATGATCTCGCTGCTGATTGGTCAGTCGCCAGCGATTCTGATCAGCGGTCTTGGTGCAATGGCTGCCGTGCTGATGTTGGTATTTAAAGATCCGATTCTTGGTCTGGTGGCAGGTATTCAGCTTTCCGCGAACGATATGCTGAAACTGGGCGACTGGCTGGAGATGCCGAAATACGGCGCGGATGGCGCGGTGATCGATATTGGGTTAACCACCGTCAAAGTGCGTAACTGGGACAATACCATTACCACTATTCCCACCTGGTCTCTGGTTTCTGACTCCTTTAAAAACTGGAGCGGGATGTCAGCATCTGGCGGGCGACGTATTAAGCGCAGTATCAGTATTGATGTCACCAGTATTCGTTTTCTTGATGAAGACGAAATGCAACGTCTGAATAAAGCGCATTTGTTAAAGCCTTATTTAACCAGCCGCCATCAGGAAATTAATGAGTGGAATCGCCAGCAAGGTTCTACGGAGTCGGTATTAAACCTGCGCCGAATGACCAATATTGGAACCTTTCGTGCCTATCTGAACGAATATCTGCGTAACCATCCGCGGATTCGTAAAGATATGACTTTAATGGTACGCCAACTGGCTCCAGGTGATAATGGTTTACCGCTCGAGATCTATGCGTTTACCAACACCGTGGTGTGGCTGGAATATGAAAGCATTCAGGCTGATATATTCGATCACATATTTGCGATTGTCGAAGAGTTTGGTCTGCGACTTCATCAGTCGCCAACCGGCAATGATATTCGCTCTCTGGCGGGTGCATTTAAGCAGTAA
PROTEIN sequence
Length: 416
MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVVLRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAGAFKQ*