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NECEvent2014_7_2_scaffold_436_13

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 10462..10551

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 30.0
  • Bit_score: 59
  • Evalue 1.70e-07
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 30.0
  • Bit_score: 59
  • Evalue 7.40e-07
DNA-directed RNA polymerase subunit omega n=153 Tax=Vibrio RepID=RPOZ_VIBC3 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 30.0
  • Bit_score: 59
  • Evalue 5.30e-07

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Taxonomy

Erwinia amylovora → Erwinia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 90
ATGGCACGCGTAACTGTTCAGGACGCTGTAGAGAAAATTGGTAACCGTTTTGACCTGGTACTGGTCGCCGCGCGTCGCGCTCGTCAGATG
PROTEIN sequence
Length: 30
MARVTVQDAVEKIGNRFDLVLVAARRARQM