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NECEvent2014_7_2_scaffold_803_1

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 2..166

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Escherichia coli P0304799.3 RepID=N3Q5V1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 54.0
  • Bit_score: 102
  • Evalue 1.00e-19
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 54.0
  • Bit_score: 102
  • Evalue 2.80e-20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 54.0
  • Bit_score: 102
  • Evalue 1.40e-19

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATCAACGCAGCAGCACGTCAGAACGGTATTTCTTACAGCAAATTCATCAATGGCCTGAAAAAAGCCTCTGTTGAAATCGACCGTAAGATCCTGGCTGATATCGCAGTATTCGACAAAGTAGCGTTCACCGCTCTGGTTGAAAAAGCGAAAGCAGCTCTGGCATAA
PROTEIN sequence
Length: 55
INAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA*