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NECEvent2014_7_2_scaffold_1548_1

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(75..491)

Top 3 Functional Annotations

Value Algorithm Source
Fimbriae Z protein n=1 Tax=Escherichia coli UMEA 3151-1 RepID=U0DMQ3_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 262
  • Evalue 1.90e-67
transcriptional regulator FimZ similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 262
  • Evalue 5.40e-68
Response regulator {ECO:0000313|EMBL:EGW97136.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 262
  • Evalue 2.70e-67

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGAAACCAACGTCGGTGATCATTATGGATACTCATCCTATCATCAGAATGTCTATTGAAGTTCTGTTGCAAAAAAACAGTGAATTGCAGATTGTCCTGAAAACGGATGATTACCGCATAACCATCGATTATCTCCGAACCCGTCCTGTTGATTTAATCATTATGGATATAGACTTGCCCGGAACAGACGGTTTTACCTTCCTGAAAAGGATCAAACAAATCCAGAGCACAGTGAAAGTGTTATTTTTATCATCGAAATCAGAATGCTTTTATGCTGGCAGAGCGATACAAGCTGGTGCTAACGGTTTTGTCAGTAAATGCAATGATCAGAATGATATTTTTCATGCCGTTCAGATGATCCTCTCCGGATACACGTTTTTTCCTAGCGAAACGCTGGTAATGACTCCAACTTATTGA
PROTEIN sequence
Length: 139
MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMILSGYTFFPSETLVMTPTY*