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NECEvent2014_7_2_scaffold_1756_1

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 2..268

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein (Fragment) n=2 Tax=Escherichia coli RepID=N4EP50_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 196
  • Evalue 8.20e-48
YD repeat protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 196
  • Evalue 2.30e-48
Protein RhsB {ECO:0000313|EMBL:EII44489.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 196
  • Evalue 1.10e-47

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
CCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATAG
PROTEIN sequence
Length: 89
PGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVTNTDPLGLEVFPRPFPLPIPWPKSPAQQQADDNAAKALTK*